Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco9g01775 | ATGGCGAAAACGAGGCCAGGCAGAAAGGACTTGGACTCGTACACCATTAGAGGAACCAACAAGATCGTCCGAGCTGGTGATTGCGTTCTGATGCGGCCCTCGGACACGTCGAAGCCCCCTTACGTGGCGCGCGTGGAGAAGATCGAGCAGGACAACAGGAACAACGTGAAGGTGCGTGTGAGGTGGTACTACAGACCCGAAGAGTCCATTGGGGGTCGCAGACAGTTCCATGGTGCCAAAGAACTTTTTCTCTCCGACCACTATGATGTGCAGAGTGCGCACACCATTGAAGGCAAGTGCCTAGTGCACTCTTTCAAGAACTACACTAAGCTTGAGAATGTGGGTGCTGAGGATTACTATTGTAGATTTGAGTACAAGGCCGCAACTGGGGCTTTCACTCCTGACCGTGTCGCTGTGTATTGCAAGTGTGAGATGCCATATAACCCGGATGACCTCATGGTACAATGTGAAGGGTGCAAGGATTGGTATCATCCTGCTTGCGTGGGCATGACTATTGAAGAAGCAAAGAAACTAGATCATTTTGTATGTTCCGAATGTTCATCTGATGATGATATGAAGAAACCACAAGCTACATTTTCTGCATCACCTGGAGCTGATGGCAAGGTGGATTCGAAGCGGCGGAAGAGATGA | 651 | 0.4992 | MAKTRPGRKDLDSYTIRGTNKIVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCLVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCSECSSDDDMKKPQATFSASPGADGKVDSKRRKR | 216 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco9g01775 | 216 | ProSiteProfiles | Zinc finger PHD-type profile. | 138 | 189 | IPR019787 | - | |
| Phco9g01775 | 216 | FunFam | Chromatin remodeling protein EBS | 1 | 132 | - | - | |
| Phco9g01775 | 216 | PANTHER | OS08G0421900 PROTEIN | 1 | 208 | - | - | |
| Phco9g01775 | 216 | MobiDBLite | consensus disorder prediction | 187 | 216 | - | - | |
| Phco9g01775 | 216 | Gene3D | - | 2 | 132 | IPR043151 | - | |
| Phco9g01775 | 216 | SMART | BAH_4 | 21 | 136 | IPR001025 | GO:0003682 | |
| Phco9g01775 | 216 | SUPERFAMILY | FYVE/PHD zinc finger | 132 | 190 | IPR011011 | - | |
| Phco9g01775 | 216 | SMART | PHD_3 | 140 | 187 | IPR001965 | - | |
| Phco9g01775 | 216 | CDD | BAH_BAHCC1 | 22 | 156 | - | - | |
| Phco9g01775 | 216 | FunFam | Bromo-adjacent homology (BAH) domain-containing protein | 133 | 204 | - | - | |
| Phco9g01775 | 216 | Pfam | BAH domain | 23 | 135 | IPR001025 | GO:0003682 | |
| Phco9g01775 | 216 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 133 | 202 | IPR013083 | - | |
| Phco9g01775 | 216 | Pfam | PHD-finger | 140 | 188 | IPR019787 | - | |
| Phco9g01775 | 216 | ProSiteProfiles | BAH domain profile. | 21 | 136 | IPR001025 | GO:0003682 | |
| Phco9g01775 | 216 | ProSitePatterns | Zinc finger PHD-type signature. | 141 | 186 | IPR019786 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco9g01775 | Phco-Chr9 | 41699650 | 41703709 | Dispersed |
Transcription factors information