Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01768 ATGGCCACACTCTTCGACTCTCTCGCCGTCGTTCGCCTCCCTTCCGCCGCCATCTCCCCCGTCGCCGCTCGCCCCACCTCCGCCAAGCTCCCGCACTGCATCGGCCTCAGACTCAGACCAATCGCCGCCCGATTCGTGGCATCCTCGGCTCCCAGAATCGCTTCGTACGCCGTGCGCGTTGTGTGCAAGGCCCAGGATACCGCCGTCGATGTGGCTCCTATAACTGATGCAAATTGGCAATCCCTTGTCCTGGAGTCTGATTCTGCTGTTTTGGTTGAATTCTGGGCTCCATGGTGTGGTCCCTGCCGAATGATTCACCCTATAATTGATGAGCTTGCAAAGCAATATGCTGGGAAGCTCAAATGTTACAAACTCAACACTGATGAGAGCCCTTCAACTGCAACTCGGTATGGAATTCGAAGCATTCCCACTGTTATGATCTTCAAGAATGGTGAGAAGAAAGATACAGTTATTGGTGCTGTGCCCAAGTCAACGTTGACCACAAGCATAGAAAATTTCGTTTGA 525 0.5295 MATLFDSLAVVRLPSAAISPVAARPTSAKLPHCIGLRLRPIAARFVASSAPRIASYAVRVVCKAQDTAVDVAPITDANWQSLVLESDSAVLVEFWAPWCGPCRMIHPIIDELAKQYAGKLKCYKLNTDESPSTATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIENFV 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01768 174 ProSitePatterns Thioredoxin family active site. 91 109 IPR017937 -
Phco9g01768 174 Gene3D Glutaredoxin 71 174 - -
Phco9g01768 174 PRINTS Thioredoxin family signature 138 149 - -
Phco9g01768 174 PRINTS Thioredoxin family signature 98 107 - -
Phco9g01768 174 PRINTS Thioredoxin family signature 90 98 - -
Phco9g01768 174 CDD TRX_family 77 171 - -
Phco9g01768 174 FunFam Thioredoxin 64 174 - -
Phco9g01768 174 ProSiteProfiles Thioredoxin domain profile. 62 174 IPR013766 -
Phco9g01768 174 Pfam Thioredoxin 71 171 IPR013766 -
Phco9g01768 174 PANTHER GEO12009P1 63 173 - -
Phco9g01768 174 NCBIfam thioredoxin 75 173 IPR005746 GO:0015035
Phco9g01768 174 SUPERFAMILY Thioredoxin-like 62 173 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01768 Phco-Chr9 41607906 41609630 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01768 9 41607906 41609630 Phco9g01768 9 41607906 41609630 ECH