Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01757 ATGGGGGATCTCATCTTCTCATTCAAGAACCAGGAACATGGTCACCATAGAGCAAGACACAACAAGAAGAGGTTAACTGAGGAGCAGGTTAGCATTCTTGAGAAATGCTTTGGTTCCAACATGAAGCTTGAACCGGAGCAGAAATTCCACCTTGCAAACCAACTTGGTGTTCCTCCAAGACAAGTTGCCATTTGGTACCAGAACAAAAGGGCACGCTGGAAGACTCAGAGCCTTGAGGTGGACCATGGTGTGCTTCAGGCAAAGCTGGAGAATGTGATGGCTGAAAAGAAGCAGCTAGAAAAAGATGTGGAAAGACTCAAAGCTGAGCTCAAGAAAGCTCAAGAGATGATGCTGATTGGAGATGTAGTCAAAGGTGGAGAAAACAGTAATACTAGTAACAGCAACAATAACAACTATAATAATAATAATAATAGTAATAATAATGGTTCTTGTTGTGAGTTTTCAACTTCTTTTGAAGAGGGAGGGAGTTCAGGGATGGTACTTGATGATGAAACTCATCATCATGAGTGTTGGCAAAGTGGTGAGGTTATGCAGGTTGAGGAGCTCTATGCTTACTTCATGGGTGCAAATTATGGGTCAAGCTTGCATGAGAAAAGGGCATAA 624 0.4231 MGDLIFSFKNQEHGHHRARHNKKRLTEEQVSILEKCFGSNMKLEPEQKFHLANQLGVPPRQVAIWYQNKRARWKTQSLEVDHGVLQAKLENVMAEKKQLEKDVERLKAELKKAQEMMLIGDVVKGGENSNTSNSNNNNYNNNNNSNNNGSCCEFSTSFEEGGSSGMVLDDETHHHECWQSGEVMQVEELYAYFMGANYGSSLHEKRA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01757 207 MobiDBLite consensus disorder prediction 124 143 - -
Phco9g01757 207 Coils Coil 82 116 - -
Phco9g01757 207 Gene3D - 14 81 - -
Phco9g01757 207 SUPERFAMILY Homeodomain-like 13 77 IPR009057 -
Phco9g01757 207 ProSitePatterns 'Homeobox' domain signature. 51 74 IPR017970 GO:0000981|GO:0006355
Phco9g01757 207 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Phco9g01757 207 MobiDBLite consensus disorder prediction 125 143 - -
Phco9g01757 207 SMART HOX_1 18 80 IPR001356 GO:0003677
Phco9g01757 207 FunFam Homeobox-leucine zipper protein ATHB-52 12 78 - -
Phco9g01757 207 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 15 145 IPR045224 GO:0003700
Phco9g01757 207 Pfam Homeodomain 20 74 IPR001356 GO:0003677
Phco9g01757 207 CDD homeodomain 19 77 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01757 Phco-Chr9 41433462 41434085 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Phco9g01757 Homeodomain 5.6e-17 CL0123