Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01744 ATGGTGTTATCGGCTTCGCCATGTTCCTTGACGAGAAGCTCACTGGAGGAGATGCTGGATTCACTTCGGCGGAGGGACGAGGAGGAGGAGAAGAAGAAGGACTTGCCACCGGCGTTGCCCGCCAGGCCGGCCTCGCGTGCAAGGCTTCCTCCGGCACGGCGGTTGCTGCCGAATGATTTTAAGATTAGCGGCAGCGAGCGCCATGTCGTGCCGCAGAACGGAGTTTCTGCTAATGAGGAGAGTGAGGTGAAGGAAAGTGATTTGGAGCAGGAGAGGAGAAGGTGTGGTTTTGGAAGCAAGAGGCTGAAGAAGGATGTGGATTCTCCTTATGTGGCACTTTCTTCCAGTGATTCATCAGGGAAGGTTTGGGAATTGGAGGGTGATGATAGCATATCTTATTTCATCAAAAAGAAGCTTCGTGTTTGGTGTAGGCAACCAAGAGGGCAGTGGGAACTGGGAATGATACAGTCAACTTCAGGAGAGCAAGCGTTCGTTTCTCTCTCAAATGGAAATGTTATGAAAGTGGACAGATCAGAGATTCTACCAGCAAATCCTGATGTTTTGGAGGATGTGGATGATCTAATTCAACTTGGTTATTTGAATGAGCCATCGGTTCTTCACAATCTTAAATCAAGATATTCTCAAGGGATGATTTATAGTAAAGCAGGGCCAATTTTAATTGCACTCAATCCTTTCAAAGATCTTCAGATGAATGGAAATGATTATGTCTCAGCTCGTAGCCAGAGAACTATGAATAGTCCTCATGTTTATGCTATAGCAGATGCAGCTTATAACAAGATGATTAGAGATGAAGTAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCTAAAATTGCACTGCAATACTTAGCTGCTCTTGGTGGTGGTGGTAATTGTGCCATAGAAAATGAATTTCTTCAGATAAATCGTATTCTAGAGGCTTTTGGGAATGCGAAAACATCTAGAAATAACAACTCTAGCAGATTTGGAAAGTTGATTGAAATTCACTTTGGCTGCACGGGTAAAATATGTGGGGCTAAAATTCAAACCTGTAAGCATTCCAGAGTTGTTCAACTGGCCCGTGACGAGAGATCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATCTGATCTTAAAGAGAAACTGAATCTTAGAGCAGTAAGTGAATATAAATATCTAGTTCAGAGTGATTGCATGTCAGTTGATGGTGTTGATGATGCCAAAAACTTTGATCAGCTAATGGAAGCACTGGATGCAGTTCGAATTTGCAAAGAGGATCAGGAGCTGATCTTTAAGATACTTGCTGCAATACTATGGTTGGGAAATATATCATTCCAAGTAGACAAAGAAAATCACATTGAGGTTGTTGAGGATGAAGCTGTAACCAGTGCTGCCCAGCTGATGGGTTGCAGTTCCCAGGATTTAATGACAGCATTGTGTACACATAACATCCAAGCTGATGAAGATACTATTGCCAAAAATTTGACGTTGAGTCAGGCAATTGAAAGAAGAGATGCAATTGCAAAATTTATCTATGCAAGCTTGTTTAACTGGCTATTAGACCAAGTTAACAAGTCACTTGAAGTGGGTAAAAAATGTACTGGGAAATCCATAAGTATCCTCGATCTTTATGGGTTTCAGACTTTCCAGAAGAATGGCTTTGAGCAGTTTTACATAAATTATGCCAATGAAAGGATTCAACAACATTATAATCGCCACCTGTTTAAACTAGAGCAGGAGGACTATGAATTGGATGGCATTGATTGGACTAAAGTAGATTTTGAGGACAATCAAGGGTGCTTGGATCTATTTGAGAAGAAACCTCAAGGTCTACTCTCTTTGTTGGATGAGGAGTCAAATTTACCAAACGCTTCTGATTTAACATTTGCCAACAAACTTAAGCATCACTTGCACCCTAATCCTTGCTTCAAAGGGGAAAGAGGAAGAGCTTTCCGTGTTCGTCACTATGCAGGAGAGGTTCTGTATGATACAAATGGCTTTTTAGAAAAGAACAGAGACACAACGTCTTCTGATTACTGCATTCAGTTCCTGTCATCATGTAATTGTGAACTGCTGCAGCTGTTCTCCAAAATGTTTAACCAGTCTCAAAAGCAGAGTGTTGCAACAAAGTTCAAGGTTCAATTGTTCAAGTTGATGCATCAGCTGGAGAGCACCATGCCTCACTTTATTCGTTGCATAGCACCAAATACTAAGCAGCTTCCTGGCATTTATGATGAAAGCCTTGTCCTACAACAGCTCAGGTGTTGTGGAGTTCCAGAAGTCGTTAGACTTTCAAGGGCTGGATATTCTACTCGAATGACCCATCAAGAGTTTTCTAGAAGGTATGCGTTTATGCTTTCTGAGACCAACGTATCGAACAATCCATTGAGCATCTCAGTTGCTGCTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCATGTTGGCTACACCAAATTGTATCTTCGAGCAGGGCAGATTGACGTACTGGAGAATACGAGAAAGCAGATTTTGCAGGGAATACTAGGGATTCAAAAATGTTTCCGTGGTCATCAAGCACGTGGTTGCTTTTGTGAACTTAAGAATGGAGTGACAACACTACAATCATTTATTCGTGGAGAAAATTCAAGAAGGAAATATGGTGTCACAGAGAAGTCTTCAATAACAATTTATTCTAGAAAACTGGAGGAGATCCATGCAATCATACTATTACAATCTGTAATTCGTGGTTGGCTGGTTAGAAGGGATGCTAGTCATGTAAATAGGTCAAAGAAATATCCTGAAAATGCTAAACCTAGGCGGAAGTCCTTTATGAAGATAATACCAGAAGTACAGGATTTGTCCAAAGAGCCAGTTCAGAATCTGCTTTCAGCTTTAGCAGAACTCCAAAGGCAGGTTGACAAGGCTGATGCAATTGTAGAGCAAAAGGAAGATGAATATATTGAGTTGAGGGAGCAGCTAAAACAATCTGAGAGAAAGAGGATTGAATATGAGACAAAAATGAAGTCAATGGAGGAGGCTTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGTAGCTGCTAGAAAGAGCCTTGCTCCTGAGAATGCTACTGTTCAACCTGTAAGACATGATTTTGTGTTACCTCGTGGTTATGATTCTGAAGATACGTCCATGGGATCTCGAACACCTGGTGAGAGCACACCAATGCTTTCTTTATCTATCCCTGATGCGGGGAGACAGGTCAATGGGACTTTAAATACAGTCAGCAATCTGATGAAGGAATTCGAGCAGCGAACACAGAACTTTGATGATGAAGTAAAATCTTTGAACGACGTTAAACTGGGGCAGTGTGCAAACATAAATTCCGTTGAAGAACTTCGGAAACTTAAACAGAGATTTGAAGGGTGGAAGAAACAATACAAGATCAGATTACGTGAGACTAAGTCAAGGCTTCATAAATCAGAATCAGAGAAAAGTTGGCGAGCATGGTGGGGGAAGTTAGGCTCAAGAGCATAA 3528 0.4133 MVLSASPCSLTRSSLEEMLDSLRRRDEEEEKKKDLPPALPARPASRARLPPARRLLPNDFKISGSERHVVPQNGVSANEESEVKESDLEQERRRCGFGSKRLKKDVDSPYVALSSSDSSGKVWELEGDDSISYFIKKKLRVWCRQPRGQWELGMIQSTSGEQAFVSLSNGNVMKVDRSEILPANPDVLEDVDDLIQLGYLNEPSVLHNLKSRYSQGMIYSKAGPILIALNPFKDLQMNGNDYVSARSQRTMNSPHVYAIADAAYNKMIRDEVNQSIIISGESGSGKTETAKIALQYLAALGGGGNCAIENEFLQINRILEAFGNAKTSRNNNSSRFGKLIEIHFGCTGKICGAKIQTCKHSRVVQLARDERSYHIFYQLCAGSSSDLKEKLNLRAVSEYKYLVQSDCMSVDGVDDAKNFDQLMEALDAVRICKEDQELIFKILAAILWLGNISFQVDKENHIEVVEDEAVTSAAQLMGCSSQDLMTALCTHNIQADEDTIAKNLTLSQAIERRDAIAKFIYASLFNWLLDQVNKSLEVGKKCTGKSISILDLYGFQTFQKNGFEQFYINYANERIQQHYNRHLFKLEQEDYELDGIDWTKVDFEDNQGCLDLFEKKPQGLLSLLDEESNLPNASDLTFANKLKHHLHPNPCFKGERGRAFRVRHYAGEVLYDTNGFLEKNRDTTSSDYCIQFLSSCNCELLQLFSKMFNQSQKQSVATKFKVQLFKLMHQLESTMPHFIRCIAPNTKQLPGIYDESLVLQQLRCCGVPEVVRLSRAGYSTRMTHQEFSRRYAFMLSETNVSNNPLSISVAALQKFNIPSEMYHVGYTKLYLRAGQIDVLENTRKQILQGILGIQKCFRGHQARGCFCELKNGVTTLQSFIRGENSRRKYGVTEKSSITIYSRKLEEIHAIILLQSVIRGWLVRRDASHVNRSKKYPENAKPRRKSFMKIIPEVQDLSKEPVQNLLSALAELQRQVDKADAIVEQKEDEYIELREQLKQSERKRIEYETKMKSMEEAWQKQMASLQMSLVAARKSLAPENATVQPVRHDFVLPRGYDSEDTSMGSRTPGESTPMLSLSIPDAGRQVNGTLNTVSNLMKEFEQRTQNFDDEVKSLNDVKLGQCANINSVEELRKLKQRFEGWKKQYKIRLRETKSRLHKSESEKSWRAWWGKLGSRA 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01744 1175 PANTHER MYOSIN 182 1167 - -
Phco9g01744 1175 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 136 185 IPR004009 GO:0003774|GO:0005524|GO:0016459
Phco9g01744 1175 ProSiteProfiles IQ motif profile. 848 875 IPR000048 GO:0005515
Phco9g01744 1175 MobiDBLite consensus disorder prediction 1052 1071 - -
Phco9g01744 1175 ProSiteProfiles Myosin motor domain profile. 189 844 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco9g01744 1175 Pfam Myosin head (motor domain) 191 832 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco9g01744 1175 MobiDBLite consensus disorder prediction 14 91 - -
Phco9g01744 1175 Coils Coil 961 1016 - -
Phco9g01744 1175 CDD MYSc_Myo8 203 832 IPR036022 -
Phco9g01744 1175 ProSiteProfiles IQ motif profile. 869 898 IPR000048 GO:0005515
Phco9g01744 1175 Gene3D - 556 734 - -
Phco9g01744 1175 Gene3D Myosin VI head, motor domain, U50 subdomain 432 712 - -
Phco9g01744 1175 Gene3D - 371 430 - -
Phco9g01744 1175 PRINTS Myosin heavy chain signature 599 627 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco9g01744 1175 PRINTS Myosin heavy chain signature 273 298 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco9g01744 1175 PRINTS Myosin heavy chain signature 546 574 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco9g01744 1175 PRINTS Myosin heavy chain signature 317 344 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco9g01744 1175 PRINTS Myosin heavy chain signature 219 238 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco9g01744 1175 SMART iq_5 845 867 IPR000048 GO:0005515
Phco9g01744 1175 SMART iq_5 905 927 IPR000048 GO:0005515
Phco9g01744 1175 SMART iq_5 868 890 IPR000048 GO:0005515
Phco9g01744 1175 Gene3D Kinesin motor domain 192 772 IPR036961 -
Phco9g01744 1175 FunFam Myosin heavy chain 371 427 - -
Phco9g01744 1175 SMART MYSc_2a 183 845 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco9g01744 1175 ProSiteProfiles IQ motif profile. 906 934 IPR000048 GO:0005515
Phco9g01744 1175 Pfam IQ calmodulin-binding motif 908 924 IPR000048 GO:0005515
Phco9g01744 1175 Pfam IQ calmodulin-binding motif 873 889 IPR000048 GO:0005515
Phco9g01744 1175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 926 IPR027417 -
Phco9g01744 1175 Coils Coil 12 32 - -
Phco9g01744 1175 Gene3D - 777 845 - -
Phco9g01744 1175 Gene3D - 850 896 - -
Phco9g01744 1175 MobiDBLite consensus disorder prediction 17 37 - -
Phco9g01744 1175 Coils Coil 1141 1161 - -
Phco9g01744 1175 Coils Coil 1096 1116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01744 Phco-Chr9 41232911 41248152 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01744 9 41232911 41248152 Phco9g01744 9 41232911 41248152 ECH
Phco10g01006 10 30267983 30277291 Phco9g01744 9 41232911 41248152 PCT