Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01743 ATGGAAGTTGAGATCGACGCTTTAAACCAAAAGAGCACCGTCTCCACTCTCGACTTCTTCGTTGCACTTTCTACAAAACCAATACACCACTCTCGTCGCCGCCGTCGACCACCGCAAGCGCCGTTGAACTCCGCGTCATCCTTTAGGGCTAAGATGAGTCGAGGAAGTGGAGGCGGATACGATCGTCATATCACTATTTTCTCTCCCGAGGGACGTCTCTTCCAAGTTGAGTATGCTTTCAAGGCTGTTAAAGCTGCTGGAATCACCTCGATCGGTGTCCGAGGAAAGGATTCCATTTGTGTTGTTACTCAGAAGAAGGTTCCGGATAAGCTTTTGGACCAGACAAGTGTTACACACCTCTTTCCCATCACGAAATACCTTGGTTTGTTGGCGACTGGCATGACAGCTGATGCTAGGACACTTGTCCAACAAGCAAGAAATGAAGCAGCTGAGTTTCGCTTTACAAATGGATATGAGATGCCTGTAGATGTGTTGGCTAGATGGATTGCAGACAAATCACAAGTCTATACCCAACATGCTTATATGAGACCACTTGGAGTAGTTGCTATGGTTTTGGGTATTGATGATGAATATGGACCACAGCTTTACAAATGTGATCCTGCTGGTCATTACTTTGGTCACAAGGCCACAAGTGCTGGATTGAAGGACCAAGAGGCAATTAATTTCTTGGAAAAGAAGATGAAGGGTGACCCTTCATTTACTTATGAGGAGACAGTTCAGACTGCCATTTCTGCTCTCCAATCAGTTCTTCAGGAGGATTTTAAGGCCACTGAGATTGAGGTTGGAGTGGTGCGGAAGGATAATCCAGAATTCAGAGTTCTAACCACTGAGGAAATTGATGAGCACTTGACTGCAATAAGTGAGCGTGACTGA 894 0.4575 MEVEIDALNQKSTVSTLDFFVALSTKPIHHSRRRRRPPQAPLNSASSFRAKMSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTQKKVPDKLLDQTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTNGYEMPVDVLARWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKGDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLTTEEIDEHLTAISERD 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01743 297 ProSitePatterns Proteasome alpha-type subunits signature. 60 82 IPR000426 GO:0006511|GO:0019773
Phco9g01743 297 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 64 292 - -
Phco9g01743 297 CDD proteasome_alpha_type_6 59 271 IPR034642 GO:0019773
Phco9g01743 297 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 59 296 IPR029055 -
Phco9g01743 297 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 52 297 IPR029055 -
Phco9g01743 297 ProSiteProfiles Proteasome alpha-type subunit profile. 75 290 IPR023332 -
Phco9g01743 297 SMART Proteasome_A_N_2 60 82 IPR000426 GO:0006511|GO:0019773
Phco9g01743 297 MobiDBLite consensus disorder prediction 28 58 - -
Phco9g01743 297 Pfam Proteasome subunit A N-terminal signature 60 82 IPR000426 GO:0006511|GO:0019773
Phco9g01743 297 FunFam Proteasome subunit alpha type 52 297 - -
Phco9g01743 297 Pfam Proteasome subunit 87 271 IPR001353 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01743 Phco-Chr9 41200665 41210237 Dispersed/Transposed