Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01740 ATGAACGAGAAGGCCAACGTCTCCAAAGAGCTCAACGCCAAACACAAGAAGATATTGGAAGGACTTCTTAAACTACAAGAGAATAAGGAATGTGCTGACTGCAAAGCTAAAGGCCCAAGATGGGCTAGTGTCAATCTTGGCATCTTTATATGCATGCAGTGTTCTGGAATACATAGAAGTCTTGGGGTACACATATCAAAGGTTCGCTCGGCAACTTTGGACACGTGGCTTCCAGAGCAGGTTGCATTCATTCAATCGATGGGAAATGAGAAGGCAAACAGTTACTGGGAAGCAGAATTACCCCCAAATTATGATAGAGTTGGAATTGAAAATTTCATTCGTGCAAAGTATGAAGAGAAGAGATGGGTTGCAAGGAATGAGAAACCAAAATCACCTTCTAGTTTTCGAGAAGAGAAAAGTCCTTCACATTGGCAAAGGCCTGTGGAAAGGGTTAGCCATAGTTATGCAGCTGTGTCTGAGAATAATTTTGAGGATAGGAAGAAAATCCAACCTTCAAATGCTATTCCTGCTACAAGAATTTGTGTTCCTGCTCCTCCCAAAGGGCCTGACCTGGTAACTCCCGTGGCAAAACCTCAAAATGTTGATAAAGTGGAATCTGTTGCACCACCACCTCAAGTCGAAACTTCAAAACAGACTACTGACACCACACCAAATTCCTCTTCTAAAGTTGACTTTTCTACGGGTCTTTTTGACATGTTATCTATGGATGATCCAAATGAAAAGGGCCCGGGTGCAGCTGAAACTATTGCTGATGATAATAACTGGGCAGGTTTTCAGTCTGCTACAGAGGCATTGTCAGCTGAAAAGAGTGATACCAGGAAATCAGTTGACAGTACACCTCAGTCCACTTCTGGAATTGAGGATTTATTTAAAGACTCACCTTCAGTTACACCAAGCTTAACTCCAGAAAACCCTCAAAAAGATGTAAAAAATGATATCATGAGCCTCTTTGAGAAGGGCAATGTGGTGTCTCCATTTGCAATGCATCAACAGCAGCTGGCCATGCTGGCACAACAACAGACTCTTCTAATGGCTGCTGCTGCTAAATCTGGTGGTGTGGATTCCAAGTACTTGGCCAACTTACAACAACAGCAGTCTCTTCTAATGGCTGCTGCTGCTAAATCTGCTGGTGGGGATTCCAAATTCCCGGCTGGTATACAACAACCTGGATCCAATATTCCTGTCCAAAGTTGGCCAGCTGCTGGCTACCCAATCCCAGGTATAATGCCCATGGGAAGTCAGGAAGATTTGCAGAAACTAATGCAGACAATGAACTTGACTGCAGCGCATTCAGCAGGGACTTCAGTTCAGTATCCACAATCTAGTTACTATGCTATGGGGCAAGTTGCTCCAGTTAATGGTTCGTCGACAACGACAGGAGCAAGTAAACCTCAGTCGGCATCTCCGGTTTCACCAGCATATTCAGTATCATCGACCACCTCAAAGACAGGGAACGATTATGATTTCTCCTCTTTAACACAAGGAATGTTTGCAAAGCACTAA 1524 0.4383 MNEKANVSKELNAKHKKILEGLLKLQENKECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWVARNEKPKSPSSFREEKSPSHWQRPVERVSHSYAAVSENNFEDRKKIQPSNAIPATRICVPAPPKGPDLVTPVAKPQNVDKVESVAPPPQVETSKQTTDTTPNSSSKVDFSTGLFDMLSMDDPNEKGPGAAETIADDNNWAGFQSATEALSAEKSDTRKSVDSTPQSTSGIEDLFKDSPSVTPSLTPENPQKDVKNDIMSLFEKGNVVSPFAMHQQQLAMLAQQQTLLMAAAAKSGGVDSKYLANLQQQQSLLMAAAAKSAGGDSKFPAGIQQPGSNIPVQSWPAAGYPIPGIMPMGSQEDLQKLMQTMNLTAAHSAGTSVQYPQSSYYAMGQVAPVNGSSTTTGASKPQSASPVSPAYSVSSTTSKTGNDYDFSSLTQGMFAKH 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01740 507 CDD ArfGap 19 117 - -
Phco9g01740 507 MobiDBLite consensus disorder prediction 180 232 - -
Phco9g01740 507 Pfam Putative GTPase activating protein for Arf 17 125 IPR001164 GO:0005096
Phco9g01740 507 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Phco9g01740 507 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Phco9g01740 507 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Phco9g01740 507 MobiDBLite consensus disorder prediction 125 146 - -
Phco9g01740 507 Gene3D Arf GTPase activating protein 1 131 IPR038508 -
Phco9g01740 507 MobiDBLite consensus disorder prediction 125 147 - -
Phco9g01740 507 MobiDBLite consensus disorder prediction 461 492 - -
Phco9g01740 507 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Phco9g01740 507 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Phco9g01740 507 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Phco9g01740 507 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Phco9g01740 507 MobiDBLite consensus disorder prediction 271 314 - -
Phco9g01740 507 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 368 IPR044520 GO:0005096
Phco9g01740 507 MobiDBLite consensus disorder prediction 211 232 - -
Phco9g01740 507 MobiDBLite consensus disorder prediction 283 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01740 Phco-Chr9 41151240 41164322 Dispersed/Transposed