Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03199 ATGGCCACTCTTCAGAGTTGGAGAAAAGCCTATGGCGCTCTCAAAGACTCCACCAAAGTTGGTCTCGCTCATGTCAATAGCTCTTACGCGGAGTTGGAAGTCGCCGTAGTCAAAGCCACCAACCACGTCGAGTGTCCTCCCAAGGAGAGATACATTCGAAAAATTTTGTTCGCAACTTCTGCTGCGCGGCCTAGAGCTGATGTTGCTTACTGCATTCATGCGCTTTCGCGTCGGTTGGCCAAGACGCGAAACTGGACGGTGGCATTGAAAACATTGATCGTCATTCATAGGTTATTGAGAGAGGGTGATCCTACTCTTAGAGAAGAATTTCTTAATTTCGCACAGAGGGGGCGCATACTCCAACTTTCTAATTTCAGAGATGATTCTAGCCCAATGGCTTGGGAATGTTCCGCCTGGGTTCGTACTTATGCATTATATTTGGAAGAAAGACTTGAATGTTTCTGGATTCTGAAATATGATATTGAAGCTGAGCGTCTACCTAAGACTGTTGCTGGGCAAGAAAAGGGGTATAGCAGGACAAGGGATTTGAACAGTGAGGAGCTATTGGAGCAATTGCCTGCTTTGCAGCGGCTTCTCTATTGCCTTGTTGGTTGCCGTCCAGAAGGAGCAGCTTTTAGCAGCTATGTGATACAATATGCCCTGGCCCTGGTTTTAAAAGAAAGCTTTAAAATTTATTGTGCTATTAATGACGGCATTATCAATCTTGTTGATAAGTTTTTTGAGATGCTCAGGCATGAAGCTGTCAAAGCCTTTGATGTCTATAAACGTGCAGGCCAGCAGGCAGAAAGTCTCTCTGATTTCTATGAAATATGCAAAAGATTGGAAATTGCTAGGAATTTTCAGTTTCCTGTTTTAACAGAGCCTCCACTATCATTTCTTGTTACAATGGAAGATTACATAAAGGATGCACCGCGACTGGTTACAGTTTCAAGCGAGCCATTATTACTGACTTACAGACCAGATGATGTTCCCACAATAGAATACAATAAATTATCTCAAGAACAGGAGCCCTCATTGCCAGTTGATGATGTTGTCTCAAATTCTGAGCTTGCTCCTCCTCCACCGTCTCACAACTATTTTGAAACTGGAGACTTACTGGGGTTGAATGACAGTACATCTGATGCATCCTTGATAGAAGAAAGAAACGCTCATGCCCTAGCCATAGTCCCTACCGAAATTGATTCACGTGCTGATCCGGCCAGAGATTTTGATCCAAACGGATGGGAGCTTGCTCTGGTCTCCAATCCAAGTACAACTGTTTCTCCAGTCAATGAGAGACAATTGGCTGGTAGGTTGAGTTCTCTCACCGTCAACAGCTTATATGATGAAGGAGCATATAGATATGCACAACAACCTGCTTTTGGAGTGCCAGCTCCAAACCCATTTGAAGTGCAAGATCCTTTTGTTTTGTCAACTAGCATCCCTCGCCCACCCACCGTACAAATGGCAACAATTTCTCAACAGCATATACATCATCCTTTCGGTCATTACCAACCATATCAGCCTCTGCAGCAGCATATGCTGATGAGCCCAGCAAATCCCTTCGAAGATGCAGGATATGGGGCATTTCCTGTGCATCCTGTTTCTCACCCTCATAATAACAATCCATTTGGAAGCACTGGCATGATGTAG 1653 0.4434 MATLQSWRKAYGALKDSTKVGLAHVNSSYAELEVAVVKATNHVECPPKERYIRKILFATSAARPRADVAYCIHALSRRLAKTRNWTVALKTLIVIHRLLREGDPTLREEFLNFAQRGRILQLSNFRDDSSPMAWECSAWVRTYALYLEERLECFWILKYDIEAERLPKTVAGQEKGYSRTRDLNSEELLEQLPALQRLLYCLVGCRPEGAAFSSYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMLRHEAVKAFDVYKRAGQQAESLSDFYEICKRLEIARNFQFPVLTEPPLSFLVTMEDYIKDAPRLVTVSSEPLLLTYRPDDVPTIEYNKLSQEQEPSLPVDDVVSNSELAPPPPSHNYFETGDLLGLNDSTSDASLIEERNAHALAIVPTEIDSRADPARDFDPNGWELALVSNPSTTVSPVNERQLAGRLSSLTVNSLYDEGAYRYAQQPAFGVPAPNPFEVQDPFVLSTSIPRPPTVQMATISQQHIHHPFGHYQPYQPLQQHMLMSPANPFEDAGYGAFPVHPVSHPHNNNPFGSTGMM 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03199 550 FunFam Clathrin assembly protein AP180 6 161 - -
Phco8g03199 550 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Phco8g03199 550 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 495 IPR045192 GO:0048268|GO:0072583
Phco8g03199 550 SMART enth_2 30 161 IPR013809 -
Phco8g03199 550 SUPERFAMILY GAT-like domain 178 309 - -
Phco8g03199 550 CDD ANTH_N 32 154 - -
Phco8g03199 550 FunFam Putative clathrin assembly protein 173 321 - -
Phco8g03199 550 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Phco8g03199 550 Gene3D - 6 161 IPR008942 -
Phco8g03199 550 SUPERFAMILY ENTH/VHS domain 32 162 IPR008942 -
Phco8g03199 550 Gene3D ANTH domain 173 322 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03199 Phco-Chr8 46690623 46698776 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03199 8 46690623 46698776 Phco8g03199 8 46690623 46698776 ECH