Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03168 ATGAGGAACTTCAAGGCTTTTGGTCACGCCATCATATCTCTCTTCATCATCTCTCTGAGTGCTAGGTGTCATGGACAAGTAGAACTTGACACGGCTCCAATGGAGAAGGCTGAGAGGGATGCTCTATTCTCCACTATTCAAGGTTTTGTTGGTAACTGGTGGAATGGCTCAGATCTCTATCCAGATCCTTGTGGTTGGACTCCTATTCAGGGGGTTTCTTGTGATCTGTTTGATGGATTTTGGTATGTTACTGTCTTGAACATTGGACCAATCCACGAAAATTCTCTAAGATGTGCAAAAAATTTGGAATTCAGACCACATTTGTTTGAGCTGAAGCACCTTAAATCTCTATCCCTATTCAAATGCTTTAAATCACAACGCAGGCATCAGGTTACCATCCCCAATGCAAACTGGGAAAATCTGGCGGGCAGCTTAGAATCACTTGAGTTTAGATCAAACACAGGTCTTGTTGGAAAAATTCCTTCGAGTTTTGGTATCCTCAAGAAGCTTCAGTCCCTAGTACTATTAGAAAATAGTTTAACAGGTGAAATTCCACCAGATATTGGCAACCTGAACAAGTTGAAGCGGCTTGTTCTTGCAGAAAACAATTTTAGTGGACATATTCCAGATATTTTTAGTGCACTGGGTGACTTGTTAATACTTGATTTAAGTAGAAATTCACTATCAGGGTCTTTACCTTTGACACTTGGATGCTTAACTTCCCTTTTGAAGCTTGATGTGAGCAATAACCATTTGGAGGGGAATCTGTTGAAAGAATTTGCTTATCTTAAGAATTTGACCCTTTTGGACCTTGGGAATAACAGATTCTCTGGTGGATTGACATTGAGTATTCAAGAGATGTATTCTTTAGAGGAAATGGTTTTGTCCAAGAATGCAATAGGTGGAGATATCAACACCCTAAAGTGGGAAAACCTTCATAACTTGGTCAGTTTGGATCTCTCTAACATGGGGTTGAAAGGGGAAATTCCTGAGTCTATATTAGAATTGAAGAGGTTGAGATTTCTAGGCCTTGGTGACAACAACCTCACAGGCAACCTTTCACCAAAACTATCAACTCTTCCTTGCCTCAATGCACTCTATGTTAGTGGTAACAATCTGGCAGGAGAGCTTAAATTCTCTATGGAGTTTTATGGTAAAATGGGAACACGTTTTGGGGCCTGGAACAACCCCAACCTTTGTTACCCTCTTGAAGTATTGCCAACTAGTCATGTTCCATTTGGGGTAAAACCATGCCAGCAGGAGATCAAATTGGTAGAATCTAATACAAATGCTGGGAATGTGAACAAGACTTTCCATTCCACAGCCTCTTCGGGACTTATGAGCCATGATCCTAATGACTTCTGGTGGACTTTTCCATTGATCATGCTTCTCATCCTAAATTCTTATATAGGTCTTTAA 1419 0.4045 MRNFKAFGHAIISLFIISLSARCHGQVELDTAPMEKAERDALFSTIQGFVGNWWNGSDLYPDPCGWTPIQGVSCDLFDGFWYVTVLNIGPIHENSLRCAKNLEFRPHLFELKHLKSLSLFKCFKSQRRHQVTIPNANWENLAGSLESLEFRSNTGLVGKIPSSFGILKKLQSLVLLENSLTGEIPPDIGNLNKLKRLVLAENNFSGHIPDIFSALGDLLILDLSRNSLSGSLPLTLGCLTSLLKLDVSNNHLEGNLLKEFAYLKNLTLLDLGNNRFSGGLTLSIQEMYSLEEMVLSKNAIGGDINTLKWENLHNLVSLDLSNMGLKGEIPESILELKRLRFLGLGDNNLTGNLSPKLSTLPCLNALYVSGNNLAGELKFSMEFYGKMGTRFGAWNNPNLCYPLEVLPTSHVPFGVKPCQQEIKLVESNTNAGNVNKTFHSTASSGLMSHDPNDFWWTFPLIMLLILNSYIGL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03168 472 PRINTS Leucine-rich repeat signature 239 252 - -
Phco8g03168 472 PRINTS Leucine-rich repeat signature 218 231 - -
Phco8g03168 472 FunFam Piriformospora indica-insensitive protein 2 306 407 - -
Phco8g03168 472 FunFam Piriformospora indica-insensitive protein 2 209 305 - -
Phco8g03168 472 Gene3D Ribonuclease Inhibitor 308 404 IPR032675 -
Phco8g03168 472 Pfam Leucine rich repeat 193 252 IPR001611 GO:0005515
Phco8g03168 472 Gene3D Ribonuclease Inhibitor 35 307 IPR032675 -
Phco8g03168 472 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 110 402 - -
Phco8g03168 472 SUPERFAMILY L domain-like 44 377 - -
Phco8g03168 472 FunFam Piriformospora indica-insensitive protein 2 37 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03168 Phco-Chr8 46310211 46312156 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03168 8 46310211 46312156 Phco8g03168 8 46310211 46312156 ECH