Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03140 ATGCAAACTCACCCTTTCTCCTACATATCCTCCTGTCCTGGTAGTAGTGCCTTCTTGGAACCTCATCATCATCATCAGGAGGCTGTGGATGAAGCCTCCATCTCCCTCTCTCTTGGCCCTCCTGGCCAACAACACAACCCCAAAGGCACTTCCTCCTCCTCCTCCTCCTCTAACCGCCATTCCACTCTGCACCATTATCGGCATAACCCTACCTCTGATGACCAGAGAGGTGTAACTGTGGCCCTTCACATTGGCCTTCCCAATCCCACCACTTCACCAAACAGTCCCACCCCCACTAGCAAGCCTGATCTTCATTTGACCTCCACTCCCATTCAGGGCCAGTACTGGATCCCTTCTCCAGCTCAAATCCTCATTGGACCCACCCAGTTCTCTTGCACTGTCTGCAACAAAATGTTCAACCGTTTCAACAACATGCAGATGCACATGTGGGGACACGGTTCACAATATAGGAAAGGACCTGAATCACTGAGAGGAGCAAAACCAGCTTCTTCAATGCTGAGGCTTCCCTGCTATTGTTGTGCTGAGGGTTGCAAAAACAACATAGACCATCCAAGGTCTAGGCCACTGAAGGATTTCAGAACTCTTCAGACTCACTACAAGAGGAAGCACGGAGCAAAGCCTTTTGGATGCAGAAAGTGTGGCAAGCCTTTTGCTGTGAGAGGGGATTGGAGGACACACGAGAAAAACTGTGGGAAGCTTTGGTTCTGCATCTGTGGTTCTGATTTCAAGCACAAGAGGTCCCTCAAAGACCATGTTCGTGCCTTTGGTGATGGCCACGCTCCACACACTGTGGAGAGTTGTGATCAGATTGGGGAGGATGACTTGTTCGGTGATGAAGATGAAGAGGAATTAGATTTAGAAGATGATGATGATGATGAAGGTTACAACAGTAATGAAGTGGTTTTTGCTTTTAATTAA 939 0.4856 MQTHPFSYISSCPGSSAFLEPHHHHQEAVDEASISLSLGPPGQQHNPKGTSSSSSSSNRHSTLHHYRHNPTSDDQRGVTVALHIGLPNPTTSPNSPTPTSKPDLHLTSTPIQGQYWIPSPAQILIGPTQFSCTVCNKMFNRFNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCDQIGEDDLFGDEDEEELDLEDDDDDEGYNSNEVVFAFN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03140 312 MobiDBLite consensus disorder prediction 36 75 - -
Phco8g03140 312 MobiDBLite consensus disorder prediction 285 303 - -
Phco8g03140 312 SUPERFAMILY beta-beta-alpha zinc fingers 115 151 IPR036236 -
Phco8g03140 312 MobiDBLite consensus disorder prediction 37 60 - -
Phco8g03140 312 SUPERFAMILY beta-beta-alpha zinc fingers 198 235 IPR036236 -
Phco8g03140 312 FunFam Zinc finger protein WIP2 184 266 - -
Phco8g03140 312 ProSitePatterns Zinc finger C2H2 type domain signature. 132 152 IPR013087 -
Phco8g03140 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 130 157 IPR013087 -
Phco8g03140 312 Gene3D Classic Zinc Finger 172 262 - -
Phco8g03140 312 PANTHER ZINC FINGER PROTEIN WIP2 22 285 IPR043584 GO:0003700|GO:0010468
Phco8g03140 312 MobiDBLite consensus disorder prediction 285 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03140 Phco-Chr8 45968435 45969961 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco8g03140 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03140 8 45968435 45969961 Phco8g03140 8 45968435 45969961 ECH