Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03129 ATGCGTTTAAAACACAAGAATTCAAAGGATTCGTTTTCTCAGAAACTCCTTTGGCCCTTCTCCTCTTCCCAAGCGTTAGGGTTTTCTCAACGCTCACTCGCCATTGGCCATAAGTGGCATCTCCGAGATAAAACCACGCTGAACCGAAAATTTGGAAAATATCAGCATTTCTGCGCGACACAAATTTTTGAAAGGAAAAAAATGTCCATGGTTGATGAGCCGCTATATCCCATAGCAGTGCTTATAGATGAACTGAAAAATGATGACATTCAGCTGCGGTTGAACTCGATTCGGAAACTATCTACGATTGCCCGGGCTCTTGGGGAGGAGCGAACGCGTAGGGAGTTGATACCCTTTTTGGGTGAGAATAATGATGATGATGATGAGGTACTTCTTGCAATGGCGGAAGAGTTGGGGGTGTTTGTTCCTTTTGTCGGGGGAGTGGAACACGCTCATGTGTTGCTCCCACCTTTGGAGACGCTTTGCACTGTTGAGGAAACTTGCGTGAGAGATAAAGCTGTGGAATCACTTTGTAGGATTGGATCACAAATGAGGGAAAGTGATTTGGTTGAGTATTTCATTCCTTTGGTGAAGAGGTTGGCAGCAGGTGAATGGTTCACTGCTCGAGTTTCTTCATGTGGGCTATTTCACATTGCTTACCCTAGTGCACCGGAAATGTCAAAGACAGAATTGAGATCAATATACAATCTGTTGTGTCAAGATGACATGCCTATGGTTAGAAGATCTGCTGCATCAAATCTTGGGAAGTTTGCTGCAACTGTTGAATACACTCATTTGAAGGCTGACACTATGTCAATTTTTGAGGATCTCACTAAGGATGATCAAGACTCTGTTAGATTGTTGGCTGTGGAGGGTTGTGCTGCACTTGGGAAGCTGCTGGAGCCACAAGATTGTGTCACACATATACTACCGGTTATTGTCAACTTCTCACAGGATAAGTCGTGGCGTGTGCGATACATGGTTGCAAATCAATTGTATGAGCTTTGTGAGGCTGTAGGCCCTGAACCTACCAGAACGGAATTGGTCCCTGCCTATGTGCGGTTGCTTCGAGACAATGAAGCTGAAGTACGGATTGCAGCTGCAGGGAAAGTGACCAATTTTTGCAGGATTTTAAATCCAGATCTTTCAATTCAGCATATTCTTCCTTGTGTGAAGGAATTGTCATCCGATTCTTCACAGCATGTTCGATCTGCTTTGGCTTCAGTGATAATGGGAATGGCTCCAGTGTTGGGAAAGGATGCAACAATTGAGCAACTTCTTCCTATTTTCCTTTCCCTTTTGAAGGACGAATTTCCTGATGTGCGCCTAAATATCATAAGCAAGCTTGATCAAGTGAATCAGGTCATTGGAATTGATTTATTATCTCAATCTTTGTTACCAGCCATTGTTGAGCTTGCTGAGGATAGGCATTGGAGAGTTCGACTTGCAATAATAGAATATATACCCTTATTGGCAAGTCAATTGGGTGTTGGGTTTTTTGATGACAAGCTTGGTGCTCTTTGCATGCAGTGGTTAGAGGACAAGGTTCATTCAATCCGTGAGGCTGCTGCTAACAACATAAAGCGCTTAGCTGAAGAATTTGGTCCTGAGTGGGCTATGCAACACATAATTCCACAGGTTGTGGATATGATTAGTAATCCACATTATTTGTACCGAATGACTATACTTCATTCCATCTCTCTGCTTGCTCCTGTTATGGGACCTGAAATCACTTGTTCAAAATTATTGCCTGTTGTTATTACTGCATCTAAAGACAGAGTACCCAACATTAAGTTCAATGTGGCAAAGGTCTTGGAGTCAATCTTCCCCATAGTGGATCAATCTGTTGTGGAAAAGTCTATCCGACCTAGTCTGGTTGAGCTCAGTGAGGATCCCGATGTTGATGTAAGATTTTTTTCTAATCAAGCACTTCAGGCTATTGATCATGTCATGATGTCTAGCTAG 1965 0.43 MRLKHKNSKDSFSQKLLWPFSSSQALGFSQRSLAIGHKWHLRDKTTLNRKFGKYQHFCATQIFERKKMSMVDEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARALGEERTRRELIPFLGENNDDDDEVLLAMAEELGVFVPFVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVEYFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEMSKTELRSIYNLLCQDDMPMVRRSAASNLGKFAATVEYTHLKADTMSIFEDLTKDDQDSVRLLAVEGCAALGKLLEPQDCVTHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTNFCRILNPDLSIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLEDKVHSIREAAANNIKRLAEEFGPEWAMQHIIPQVVDMISNPHYLYRMTILHSISLLAPVMGPEITCSKLLPVVITASKDRVPNIKFNVAKVLESIFPIVDQSVVEKSIRPSLVELSEDPDVDVRFFSNQALQAIDHVMMSS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03129 654 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 71 649 - -
Phco8g03129 654 Pfam HEAT repeats 428 527 - -
Phco8g03129 654 Pfam HEAT repeat 309 337 IPR000357 GO:0005515
Phco8g03129 654 SUPERFAMILY ARM repeat 75 647 IPR016024 -
Phco8g03129 654 ProSiteProfiles HEAT repeat profile. 348 386 IPR021133 -
Phco8g03129 654 ProSiteProfiles HEAT repeat profile. 387 425 IPR021133 -
Phco8g03129 654 Gene3D - 70 650 IPR011989 -
Phco8g03129 654 ProSiteProfiles HEAT repeat profile. 426 464 IPR021133 -
Phco8g03129 654 ProSiteProfiles HEAT repeat profile. 504 542 IPR021133 -
Phco8g03129 654 ProSiteProfiles HEAT repeat profile. 543 581 IPR021133 -
Phco8g03129 654 ProSiteProfiles HEAT repeat profile. 582 620 IPR021133 -
Phco8g03129 654 ProSiteProfiles HEAT repeat profile. 270 308 IPR021133 -
Phco8g03129 654 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 69 648 - -
Phco8g03129 654 ProSiteProfiles HEAT repeat profile. 309 347 IPR021133 -
Phco8g03129 654 ProSiteProfiles HEAT repeat profile. 465 503 IPR021133 -
Phco8g03129 654 ProSiteProfiles HEAT repeat profile. 77 115 IPR021133 -
Phco8g03129 654 ProSiteProfiles HEAT repeat profile. 621 654 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03129 Phco-Chr8 45788115 45796427 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03129 8 45788115 45796427 Phco8g03129 8 45788115 45796427 ECH