Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03105 ATGGACAATAGTATTCTGGGTCTTCTCAAACTTCGAATTAAAAGAGGTATTGATCTTGCAATTCGCGATGCCATTAAAGGACGTGCCAGTGACCCTTATGTCGTCGTCAGCATGGGCGATCAGAAGCTGAAGACTTGTGTTATAAAAAACAACTGCAATCCTGAGTGGAACGAAGAAAGGACCATTTCTATAAAGGACGTTACAACCCCAATACGTCTGGCAGTTTATGACAAAGACACATTCTCAGGGGATGACAAAATGGGAGATGCAGATATAGACTTAAAACCATATATTCAGTGTGTGCAAAGAGGGTTAACTAACCTCCCAGAGGGTTCTGTTGTGACCACGATTCAACCAGATGAAACTAATTGCCTTGCCAAAGAAAGCACCTGCATTTGGCGAGACGAAAACATCATCCAAGAAATGATTTTGAGACTCAGAAATGTTGAGAGTGGGGAAGTAGTTGTGGAAATTGAGTGGGTTGATGTTATTGGTTGCAAGGGCTTATCACATCTACAACTTTAA 525 0.4152 MDNSILGLLKLRIKRGIDLAIRDAIKGRASDPYVVVSMGDQKLKTCVIKNNCNPEWNEERTISIKDVTTPIRLAVYDKDTFSGDDKMGDADIDLKPYIQCVQRGLTNLPEGSVVTTIQPDETNCLAKESTCIWRDENIIQEMILRLRNVESGEVVVEIEWVDVIGCKGLSHLQL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03105 174 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Phco8g03105 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 5 166 IPR044562 -
Phco8g03105 174 Pfam C2 domain 8 96 IPR000008 -
Phco8g03105 174 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 104 IPR035892 -
Phco8g03105 174 Gene3D C2 domain 5 166 IPR035892 -
Phco8g03105 174 SMART C2_3c 8 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03105 Phco-Chr8 45499543 45501875 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03105 8 45499543 45501875 Phco8g03105 8 45499543 45501875 ECH
Phco8g03105 8 45499543 45501875 Phco5g00326 5 2760456 2762488 ECH
Phco8g03105 8 45499543 45501875 Phco2g02644 2 56143466 56145321 ECH