Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03086 ATGTTGATGAAATACTTGGCTCAATTCTACTCTCATATCAAATGGGTGTTGGATTTTCTTCTCTTTATCCCTTTCTATAAGCTCCACGATTCTCAAATGCCAATGATTGCAGAAGACCAAAGCATATGCTACTATGAACACACCTCTGACACAGAGGAGGATGATGACTGTGCTGTTTGTCTGAGCAAAATCGGAGATGGTGAAGAGATTAGAGTGCTTAGATGTGAACATTTCTTTCACAGAAACTGCTTGGATGAATGGGTTGCTCTCAAAAACGCATCTTGCCCTCTTTGCAGAGAACCAGTTAGGTCAAGAAGAACCATGAATGAAGTTGGAGCTGAAGTTCTGTGGTTTGATTTTTGCTCTGTAACTAATGAAGGTGACGACAGCTGGTGGCTACGTTGA 405 0.4148 MLMKYLAQFYSHIKWVLDFLLFIPFYKLHDSQMPMIAEDQSICYYEHTSDTEEDDDCAVCLSKIGDGEEIRVLRCEHFFHRNCLDEWVALKNASCPLCREPVRSRRTMNEVGAEVLWFDFCSVTNEGDDSWWLR 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03086 134 ProSiteProfiles Zinc finger RING-type profile. 57 99 IPR001841 -
Phco8g03086 134 PANTHER - 31 108 - -
Phco8g03086 134 SMART ring_2 57 98 IPR001841 -
Phco8g03086 134 Pfam Ring finger domain 55 99 IPR001841 -
Phco8g03086 134 SUPERFAMILY RING/U-box 43 106 - -
Phco8g03086 134 SMART ringv_2 56 99 IPR011016 GO:0008270
Phco8g03086 134 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 109 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03086 Phco-Chr8 45243036 45243440 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03086 8 45243036 45243440 Phco8g03086 8 45243036 45243440 ECH