Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03054 ATGAATACCTGCTATTTCAGCCTTTGGTTTGTGTTAACTTTGGTCTTACCCTTATCATCATCATCATTACTGAACTCATATCCCACAACACACACTCCTGCTTTGTATGTTTTTGGTGACTCTCTGATTGATTGTGGAAATAACAACCATCTTCCTGGCGGTGGTGGAGCTTCTTTTCTTCCTTATGGTATAGACTTCATGCATGGCAAACCTACAGGTCGAGCCACAAATGGAAAAACGGTGGCTGATTTCCTTGCTATACATTTAGGACTACCCTTAACCCCTCCCTACTTGGGTCTTTCGAATCATGAAAGGAACAAAGTAAGCACAGGCATTAATTATGCATCTGGTGGGTCAGGTATTCTGCCAGATACCAACAACATTACGTCTTTGACACTAGACAAACAAATTATGTTCTTCCATAGGACTGTTACGCATAATTTGCCTAAGATGTTCACTGAGAATGAAAAATTAGAGAAGCATATTTCTGAATCCTTGTTTTTTGTCTCTACTGGGGTGAATGATTACTTGCGTAATGAAACCTTCCGTGGCAACAAGAGCTTCACTTTTTTCCTTCTAAGTCAATTCACCGTGCGCATCCAGAGATTGTATAGCCTAGGAGCAAGAAAATTTTTGGTGAACAACATTCCCCCAGCAGGTTGCTTTCCATCAAGAGCTATCCACACAAGACCAATTGGAAAATGTGATGAGAAAATAAACAAAGGGATCATCTTTTACAATAAGAGGATGCGTGAAGTACTCCATGAACTCCAATCAAAGCTTCCTGGCTTCACCTTTATACTTTCAGATCTCTATGGATTCCTAAAGAAAATGCAGCAAAATGGAAGTTATTATGGAATAGTGGAAACATGGAAACCTTGTTGTCCCAATACCATTTGTGGTGATCTCAAATGTAAGCCCAACAGTGTTCCTTGTGCAAACAGAGACACTCATCTTTTCTTTGATCCAAACCACCCCTCCCAAATCGCAAACCAAGTTTTGCTAAGATCCCAAATGAGGAATGTGGAGTATGATGATGGTATTGAAGGTTGCAAAAACCATGTGCTTCGCAGACTGCTTTTTCTGAAAGTCGCATATTTGACACTAAGACAATTCGGTGGCTATTTTGATCGCAATTTGCAACCACTTTTGATCAATATGGTAGACGATCTAGCTATACATTTAGGACTACCCTTAACCCCTCCCTACTTGGGTCTTTCGAATCATGAAAGGAACAAAGTAAGCACAAGCATTAATTATGCATCTGTTGGGTCAGGTATTCTGCAAGATACCAACAACAATACGTCTTTGACACTAGACAAACAAATTATGTTCTTCCATAGGACTGTTAAGCATAATTTGCCTAAGATGTTCACTGAGAATGAAAAATTAGAGAAGCATATTTCTGAATCCTTGTTTTTTGTCTCTACTGGGGTGAATGATTACTTGCGTAATGAAACCTTCCGTGGCAACAAGAGCTTCGCTTTTTTTTTTTCCTTCTAA 1503 0.3945 MNTCYFSLWFVLTLVLPLSSSSLLNSYPTTHTPALYVFGDSLIDCGNNNHLPGGGGASFLPYGIDFMHGKPTGRATNGKTVADFLAIHLGLPLTPPYLGLSNHERNKVSTGINYASGGSGILPDTNNITSLTLDKQIMFFHRTVTHNLPKMFTENEKLEKHISESLFFVSTGVNDYLRNETFRGNKSFTFFLLSQFTVRIQRLYSLGARKFLVNNIPPAGCFPSRAIHTRPIGKCDEKINKGIIFYNKRMREVLHELQSKLPGFTFILSDLYGFLKKMQQNGSYYGIVETWKPCCPNTICGDLKCKPNSVPCANRDTHLFFDPNHPSQIANQVLLRSQMRNVEYDDGIEGCKNHVLRRLLFLKVAYLTLRQFGGYFDRNLQPLLINMVDDLAIHLGLPLTPPYLGLSNHERNKVSTSINYASVGSGILQDTNNNTSLTLDKQIMFFHRTVKHNLPKMFTENEKLEKHISESLFFVSTGVNDYLRNETFRGNKSFAFFFSF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03054 500 SUPERFAMILY SGNH hydrolase 35 336 - -
Phco8g03054 500 CDD SGNH_plant_lipase_like 33 334 IPR035669 -
Phco8g03054 500 Pfam GDSL-like Lipase/Acylhydrolase 35 333 IPR001087 GO:0016788
Phco8g03054 500 Gene3D SGNH hydrolase 367 495 IPR036514 -
Phco8g03054 500 Gene3D SGNH hydrolase 27 343 IPR036514 -
Phco8g03054 500 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 386 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03054 Phco-Chr8 44868526 44875939 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03054 8 44868526 44875939 Phco8g03054 8 44868526 44875939 ECH