Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03037 ATGTTCATTCAACCTTCCGCGCACTCTAGCAGGACCCCTTTCCTCTCACTCATTTCCCTTCAAAGAAAACCTGTTTTGGAGCATCGTGTCGGGGAGATCACGAATCCTCAGAAACTGACTGCAATGGCTTTTATGTCGGAGGTCAACATGAGCTTCTCTCACTACATGGATGATGAATACGAGAAACTCTTCCGGAGAATGAACCCTCCCAGGGTTGTAATCGATAATGAAGCCTGCAAGAATGCCACTGTAATAAGGGTTGATAGTGCAAACAAGCATGGAATACTTCTTGAAGTTGTACAGATCCTTACTGATCTAAACCTCATCATAACCAAGGCTTACATATCTTCTGATGGTGGATGGTTCATGGATGTTTTTAATGTTACTGGACAAGATGGAAACAAGGTTACTGATGAAGCCATTTTGGATTACATTAGAAAGTCTCTTGGTCCCGAATCTTGTGTTACTTCTCGCATTAGATCTGTTGGAGTTGAGCAAACAATGGACCACACAGTAATTGAGCTTATGGGAAGTGATAGGCCAGGATTGCTTTCAGAAGTCAGTGCTGTTTTGACCAACCTCAAGTGCAATATAGTGAATGCAGAGGTGTGGACTCACAACACCCGGGCAGCCGCTGTAATGCACGTGACAGATGAAGAGACCGGATCTGCTATCACTGACCCTAAGAGGCTCTCTATAGTCAAGGAACTTCTATGCAATGTGCTTGGTGGTGGCAACAAGAAGAGAGGAGCTAAAACTGTTGTCACAGATGAAGTCACACACACTGAGAGAAGGCTTCACCAAATGATGTTTGCTGATAGGGATTATGAACGAGATAGTGATGACGGCTTTGATGAGAAGCAAAGGCCAAATGTGAATGTTGTGAATTGGTCTGACAATGATTATTCAGTTGTAACTATTCAGTGTAAGGACAGGCCAAAGCTTCTCTTCGACACAGTTTGTACTTTGACAGACATGGAGTATGTGGTTTTTCATGCCAATATCGATGCCGAGGGGCCAGAAGCATATCAGGAATATTACATCAAGCATATTGACGGGTCCCCTGTGAAATCAGATGCAGAAAGACAAAGAGTGATACAATGTCTTGCAGCTGCAATTGAGAGAAGAGTTTCTGACGGTTTGAAGCTAGAACTCTGCACCACCGACAGAGTTGGACTTCTATCTGATGTCACGCGTATCTTCAGAGAGAATAGCCTCACAGTTACAAGGGCAGAAGTGTCCACAAAAGGAGGCAAAGCTGTTAACACTTTCTATGTTCGTGGGGCATCTGGTTTCCCTGTTGATTTGAAGACCATAGAATCCATTAGGCAAACAATAGGCAACACAATCCTTAAAGTAAAGGGTAGCCCTTCAGAGATGAAATCTGTTCCTCAGGATTCTCCCTCCAGATCCCTGTTTAGTGGTCTTTTCAAGTCCAGATCTTTTGTGAACTTTGGCTTGGTTAAGTCTTATTCTTGA 1479 0.4354 MFIQPSAHSSRTPFLSLISLQRKPVLEHRVGEITNPQKLTAMAFMSEVNMSFSHYMDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSRIRSVGVEQTMDHTVIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTRAAAVMHVTDEETGSAITDPKRLSIVKELLCNVLGGGNKKRGAKTVVTDEVTHTERRLHQMMFADRDYERDSDDGFDEKQRPNVNVVNWSDNDYSVVTIQCKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAYQEYYIKHIDGSPVKSDAERQRVIQCLAAAIERRVSDGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVSTKGGKAVNTFYVRGASGFPVDLKTIESIRQTIGNTILKVKGSPSEMKSVPQDSPSRSLFSGLFKSRSFVNFGLVKSYS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03037 492 SUPERFAMILY ACT-like 79 147 IPR045865 -
Phco8g03037 492 ProSiteProfiles ACT domain profile. 84 160 IPR002912 -
Phco8g03037 492 Gene3D - 381 454 - -
Phco8g03037 492 CDD ACT_ACR_4 380 447 - -
Phco8g03037 492 CDD ACT_ACR_2 171 244 - -
Phco8g03037 492 Gene3D - 167 238 - -
Phco8g03037 492 ProSiteProfiles ACT domain profile. 382 458 IPR002912 -
Phco8g03037 492 SUPERFAMILY ACT-like 167 218 IPR045865 -
Phco8g03037 492 ProSiteProfiles ACT domain profile. 172 259 IPR002912 -
Phco8g03037 492 Pfam ACT domain 171 224 IPR002912 -
Phco8g03037 492 Pfam ACT domain 388 442 IPR002912 -
Phco8g03037 492 Pfam ACT domain 83 143 IPR002912 -
Phco8g03037 492 SUPERFAMILY ACT-like 378 447 IPR045865 -
Phco8g03037 492 CDD ACT_ACR_3 302 376 - -
Phco8g03037 492 CDD ACT_ACR_1 82 152 - -
Phco8g03037 492 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 55 455 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03037 Phco-Chr8 44623641 44627719 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03037 8 44623641 44627719 Phco8g03037 8 44623641 44627719 ECH