LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco8g02997	ATGGCTCTGGCCCACACTTTTCAAGAGTGCTTATGTAATATGGATCAAGAAGATAGCAAGATTGACCCTGTGAATCCTTCTGAACTGTCTTCTAATCCTCCGGCATCAGGGACAACTGAGATGATAACCAGTGAGAATGCTCTGTCATCTGGAAAGGATGATATGCTGGGTATCGAGAATCCTCCATCTTCGGGAAAAGATGATGTGATGGGTAACGAGAATCTTCCAGAAGTGTCTTCTAATTCTATGTCATTAGCAAAAGATGGTACTGTGGGCACTGTAAATCCTACTGAAGTGTCTTCTAATCCTATGTCTTTGATAAAAGATGATATCATGAGCACTGATAATCCTTTGTCGTCTGGAGAAGATTATGAGAAGTGTGTTGAGAATCCTCCCGAATTGTCTTCTAGTTCTCCAACGTCAGGAAAAGATGGCTTGATGGGCATTGTGAATCCCAGTGAAGTGTTTTCTAGTCCTCTGTCACCAGGAAAACATGATATGTTGAACAGTGAGAATCTTCCTGAAGTGACGTTAGGTCATTCTTCTTCTGGAGAAGTCGATGGAAAGAAGGATATTGATTCTCCTGAAGGTACTAGTAAACCAGATTTGAGTGGCAAGAATACCCTGCGACTTTTGAAGGCAAAATCTAAAATTGTTAAGAAATCTCAAGCTGGTAAACTTCAGGGGAAGAACAATGGTTCTCTAAAGGTTCATGGGAAAAGAAGAATTATGAGTTCTAAAAAAGTGGTGGATAATGCTGATGGGAAACAAGTTTCAGACTTTAGTGAGCTAAAGGAAACTAATGATGAACCATCTAAGGGTAAGGGTGAGGAGGCTGAAAGCCAAAATAAGAGCACTGCTGACAGAAGTCCCAAGGAAGAGTCAGACAGTAGCCAACTGAAGGTTACTGATCCTCCTGAAGGATCTAGTAAACCAGAGTTGAGTGACAAGAATACTCCACAATCATTGAAGGCAAAATATAAAATTGTTAAGAAATCTCAGGCTGGTAAATCATTGAAGAACAGTGGTACTCAGCAGATTCATCGCAAAAGAAGAATTAGTATTTCCAAAAAAGTGTTGGATAATGCAGATGAGAAACAAATTTCAGACAGTAGCCACCTGAAGGAAACTGATAATGAACCACTGAAGGGTAAGAGTCAGGAGGTTGAAAAAAAAGTAAAAGAAAGCCAAAACAGGAGCACCAATGGCAAAAGTCGTAGAGAGAAGATCCAGCAGGCTCGTAAGGATAATACTGAGCAAAATCTAGAGAGTGAAGAGAAACATATGGACTTACGCATGGGTTCTAGGAGCATAAAATACAAAGTTATGAGAAGTGGCATGGAAAGGAATCAATTGAAAGACAAGAAGGGTGAAAAGCTTGGTGGTTTCATCTTTATGTGCAATGCAAAGACAAAGCCTGATTGTTTCCGCTATCGTGTCATGGGTGTTTCAGCTGGTAAAAAGGATGATGTTTTACAAATCAAACCTGGGCTTAAGCTTTTTCTTTATGATTTTGATCTGAAGCTACTGTATGGTATTTACAAGGCTTCATCTTCTGGTAGCATGAAGCTTGAACCCAAAGCTTTTGGTGGCAAATTTCCTGCTCAGGTGCGGTTCAAAATTGCTGCTGATTGTTTCCCACTACCTGAGAGCGTTTTCAAAAAAGCGATCAAGGATAATTATAATGAAAAAAACAAGTTCAGAACAGAACTTACTGTTAGACAAGTGAGGAAGCTCACTCAACTTTTCCAACCAGTTGGAATTCGTTCAGGTGTGCACCCTGTCCACTCCCAGCCAAAAGTAATAATTCGAGATAGAGAAAATCCCGACAGTATTAGGGGATCATGGTCCCAGTTGCAGAGGGAACACTATAACGTGCAGTCTTTCTATAGGGATCATCAAATTGACCAACGAGAGGAAATTGCTCATGATCTGTATCCAATGGAGAACAATCGATCTTATAGTCTACCAAGATATAGAAGGAATATGGCTACCACATCTCATGTTAATCCTAGATTGGAATCTTATGACAGAGACTATGAACCTCATCACCTGGACCATGGCTACCCGAGAAATGTTCCTGCTCATGTAGAAAGTGTCCGAACTGATCATCTTTATTTGAATGACAGTAGGGATCCTTATCATGTCTATCACCACGGTGTTTCACCTAGGGATGCATATTTGGGACCTTTAAGTAGGGAGGAAAACTCTTATTTGAATAGGCGAAGACATTTTGTTGGGACGGATAACTTGCCAATGAGAGAGGCTGAACGAGATAGGCATTACCCAATCTATGATGCTCCTGATGCTTTGTCTGATCGTCATCAACTGCGGCCATATCATGGAGACAGGTTGCCAGTTTCTTCTCGTTACTCTTTTGCTGGCCCTTCATTTCGTCACCACTGA	2406	0.409	MALAHTFQECLCNMDQEDSKIDPVNPSELSSNPPASGTTEMITSENALSSGKDDMLGIENPPSSGKDDVMGNENLPEVSSNSMSLAKDGTVGTVNPTEVSSNPMSLIKDDIMSTDNPLSSGEDYEKCVENPPELSSSSPTSGKDGLMGIVNPSEVFSSPLSPGKHDMLNSENLPEVTLGHSSSGEVDGKKDIDSPEGTSKPDLSGKNTLRLLKAKSKIVKKSQAGKLQGKNNGSLKVHGKRRIMSSKKVVDNADGKQVSDFSELKETNDEPSKGKGEEAESQNKSTADRSPKEESDSSQLKVTDPPEGSSKPELSDKNTPQSLKAKYKIVKKSQAGKSLKNSGTQQIHRKRRISISKKVLDNADEKQISDSSHLKETDNEPLKGKSQEVEKKVKESQNRSTNGKSRREKIQQARKDNTEQNLESEEKHMDLRMGSRSIKYKVMRSGMERNQLKDKKGEKLGGFIFMCNAKTKPDCFRYRVMGVSAGKKDDVLQIKPGLKLFLYDFDLKLLYGIYKASSSGSMKLEPKAFGGKFPAQVRFKIAADCFPLPESVFKKAIKDNYNEKNKFRTELTVRQVRKLTQLFQPVGIRSGVHPVHSQPKVIIRDRENPDSIRGSWSQLQREHYNVQSFYRDHQIDQREEIAHDLYPMENNRSYSLPRYRRNMATTSHVNPRLESYDRDYEPHHLDHGYPRNVPAHVESVRTDHLYLNDSRDPYHVYHHGVSPRDAYLGPLSREENSYLNRRRHFVGTDNLPMREAERDRHYPIYDAPDALSDRHQLRPYHGDRLPVSSRYSFAGPSFRHH	801

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco8g02997	801	MobiDBLite	consensus disorder prediction	258	300	-	-
	Phco8g02997	801	ProSiteProfiles	DCD domain profile.	458	585	IPR013989	-
	Phco8g02997	801	MobiDBLite	consensus disorder prediction	14	429	-	-
	Phco8g02997	801	MobiDBLite	consensus disorder prediction	356	429	-	-
	Phco8g02997	801	Pfam	Development and cell death domain	461	583	IPR013989	-
	Phco8g02997	801	PANTHER	DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED	301	797	-	-
	Phco8g02997	801	MobiDBLite	consensus disorder prediction	23	50	-	-
	Phco8g02997	801	SMART	dcd	458	585	IPR013989	-
	Phco8g02997	801	MobiDBLite	consensus disorder prediction	74	120	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco8g02997	Phco-Chr8	43981945	43990760	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco4g01856	4	36529437	36533051	Phco8g02997	8	43981945	43990760	PCT