Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02982 ATGTTTTTATCTGTGTCCATTGGTTCTTCTGCGGCATTACGGTTTCCACTCAGATGCAACGCCAAAATCTCTTCTCCCCGGGTTGTTGCTGCTGATGCCTTCCCTTCCTTTCTCCCCAAAGAGTTGCAAACCATTGAAGACCCTTTTGCCAGAAAACTCGCCATGCGGATTCAGAGGCTACCTGTGCCTGTTAGGTTCTCAGAAAACCCCATCATGAGTAGTTGTGTGAAGCCAGTGGTGCAGAGCAATGAAACTCCAGTTGTTCTTCTACATGGTTTTGACAGCTCTTGTTTAGAATGGAGATATGTACTACCATTGCTCGAGGAATCTGGTATTGAGACCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAAACTTCCTCCTTGTGATGTGGAATCCAAGCGTGATCACTTCTACCAGTTTTGGAAATGCTACATCAGAAGGCCAATGACATTAGTTGGACCAAGCCTTGGCTCTGCTGTTGCCATTGACTTTGCAGTCAATTATCCCGAAGCTGTGGAGAAGCTTGTTCTGATTGGTGCTAGTGTATATGCAGAAGGAACTGGAAAGCTGGCAACCTTGCCCAGAGCAGTAGCCTATGCTGGGGTTAATTTATTGAAGAGCTTTCCATTACGCTTATATGCCACCTATTTGACCTTCACAAACATTTCCTTCAGCACTAGCCTTGATTGGACTAATGTGGGACGATTGCATTGTTCATTGCCTTGGTGGAATGATGCTACTGTTGATTTTATGACAAGTGGTGGTTACAATGTTGCTCCTTTGATAGGAAAGGTAAAACAGAAAACACTGATAATATGGGGTGAAAATGATCGCATCATCAGCAATAAGTTTGCAGTGCAACTCCACTGTGAATTACCTGATGCAGCTATACGCCAAATACCCCATTGTGGCCATCTTCCTCATCTGGAAAGACCAGATTCTACCATCAAATTAATTGTTGAATTTGTGCAAAGAGAGGCTAAGCAATTGAATCCATATGTTGCACCAGTATGA 1029 0.4373 MFLSVSIGSSAALRFPLRCNAKISSPRVVAADAFPSFLPKELQTIEDPFARKLAMRIQRLPVPVRFSENPIMSSCVKPVVQSNETPVVLLHGFDSSCLEWRYVLPLLEESGIETWAIDILGWGFSDLEKLPPCDVESKRDHFYQFWKCYIRRPMTLVGPSLGSAVAIDFAVNYPEAVEKLVLIGASVYAEGTGKLATLPRAVAYAGVNLLKSFPLRLYATYLTFTNISFSTSLDWTNVGRLHCSLPWWNDATVDFMTSGGYNVAPLIGKVKQKTLIIWGENDRIISNKFAVQLHCELPDAAIRQIPHCGHLPHLERPDSTIKLIVEFVQREAKQLNPYVAPV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02982 342 PRINTS Alpha/beta hydrolase fold signature 111 126 IPR000073 -
Phco8g02982 342 PRINTS Alpha/beta hydrolase fold signature 170 183 IPR000073 -
Phco8g02982 342 PRINTS Alpha/beta hydrolase fold signature 156 169 IPR000073 -
Phco8g02982 342 PRINTS Alpha/beta hydrolase fold signature 274 288 IPR000073 -
Phco8g02982 342 PANTHER HYDROLASE 16 331 - -
Phco8g02982 342 Gene3D alpha/beta hydrolase 75 335 IPR029058 -
Phco8g02982 342 PRINTS Epoxide hydrolase signature 305 327 IPR000639 GO:0003824
Phco8g02982 342 PRINTS Epoxide hydrolase signature 170 183 IPR000639 GO:0003824
Phco8g02982 342 PRINTS Epoxide hydrolase signature 91 109 IPR000639 GO:0003824
Phco8g02982 342 PRINTS Epoxide hydrolase signature 111 126 IPR000639 GO:0003824
Phco8g02982 342 Pfam Alpha/beta hydrolase family 87 320 IPR000073 -
Phco8g02982 342 SUPERFAMILY alpha/beta-Hydrolases 84 329 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02982 Phco-Chr8 43824049 43830093 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02982 8 43824049 43830093 Phco8g02982 8 43824049 43830093 ECH
Phco4g01919 4 38110602 38116559 Phco8g02982 8 43824049 43830093 PCT