Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02980 ATGGCGTCGCAAATGGCGATCCTCTTTCGCACGCGCTCCCTCCTCTTCTCGAAATCCTCCTCCCTCATCAAAACCATATCCACATTCCCCTTCCTCTTGCAGGAACCTCAGCTGGCGGATCCCACCCCTCTCCCTCCCAACCCCGCCTCCGGCAGCCCTCTCTACCACCAAAACTGGCGCACCCCTGGCCCCTCCTCTCATCCATCTTCCCACGCGCTCGCTCCCGTCGGATTCTACAACCGCGCCTCCTCCGACTCCTCCGACCCTCAGGCGCTACTCGACCTCTTCGGCGATTGCATGGCCTCGCACCAGTGGACAGAAGTCAAGAACCTCTTCGAGACCTGGGTCCGCGCCCTCGACAAGACTGGCAAGCCTAACCGCCCCGACGTCAACCTCTTCAACCACTACCTCCGCGCCAACCTCATGCTCGGCGCTTCCCCCTCCGACCTCCTCGACCTCGTTGCTCAGATGGACGAGTTCAATGTAAAGCCCAATACGGCGTCGTTTAACCTCGTCCTCAAAGCCATGTGCCAGGCCAACGAAACCGTCGCCGCGGAAAAATTGCTCCAACGGATGCTGCAGACAGGAAATGACTCTCTTCCTGATGACGAATCATACGACTTAGTCATTGGAATGCTCTTTTCCAAAGACCAGATTGATGCTGCATTCAAATATATAGATCTAATTTTGAAATCTGGTAACGTCTTGTCAATGAAGGTATTTATGAGCTGTGTAAAGAGATGTCTCAGTAAGGGAAGGCTTGATACATTGGTGACAATAATTGAAAGGTGCAAGGCATCAGATAAGAACAAAGCTCTTTGCCCCAACTGGGACTTGTGCAATTTTATTGTTGAAACTGCAACTGGAGGGGATAATAGCAAACTAGCTATTTTTGGCCTGGAGTATATGGCCAGATGGATTGTAAAGGGTGAACGTCAAAGACCCCCTATATTTCTGTCTGTAGATGAAGGTTTGGTTCTGTCAGCAATTTTGACTGCTGGTAGATCCTATAGTTCTGAGTTGCTAGGGATATCATGGGCTGTTTTGGACCGCTCACTGAGTAAAAAGAAAGCCCCTAATCCTGAGTCGTATCGTGGGAAGATATATGCTCTTGCATCATTGGGAAATCTACAAAAGGCTTTTAGTACTCTGAATGAGTATGAGTTGGCTTATGGAGACGCAGGTCCAGAAGCTGAAGAATTGTTCTGCCCATTTACTTCGTTGCATCCATTGGTTGTGGCATGCTCCAAGAAGGGTTTTGAGACTCTAGATAATGTTTATTTTCAACTGGAGAGTTTAAACCATGCAGAGTGTCCTTATAAATCAGTTGCTGCACTAAACTGCGTCATTTTAGGATGTGCAAACATATGGGACCTTGATCGAGCTTATCAAACTTTTGAGTCAATTGGATCTACTTTTGGGTTGAGCCCTAATATCCATTCGTACAACGGGCTGATGTATGCCTTTGGGAAGCTCAAGAAGACACATGAAGCTTCGAAAGTGTTTGAGCACTTGGTGAGTCTGGGTCTCAAGCCTAATGCAAAATCATATTCTCTGCTAATTGAAGCCCACCTGATTAACCGGGATGTAAATTCTGCTCTTGCAGTGGTTGATGATATGATAACTGCTGGATTTGAACCGTCAAAAGAGATTCTGAAAATGCTCAGGCGGCGATGCGTGAGAGAATTGGACTACCAAAGCGATGACCGAGTAAAATCACTGGCGAATTCCTTGAATTATAGATTGGGTACAGAAGCCCGGCGGGACATTCTGTTTAATCTGGACTACAGTGTGGGTTATGCTTGA 1806 0.479 MASQMAILFRTRSLLFSKSSSLIKTISTFPFLLQEPQLADPTPLPPNPASGSPLYHQNWRTPGPSSHPSSHALAPVGFYNRASSDSSDPQALLDLFGDCMASHQWTEVKNLFETWVRALDKTGKPNRPDVNLFNHYLRANLMLGASPSDLLDLVAQMDEFNVKPNTASFNLVLKAMCQANETVAAEKLLQRMLQTGNDSLPDDESYDLVIGMLFSKDQIDAAFKYIDLILKSGNVLSMKVFMSCVKRCLSKGRLDTLVTIIERCKASDKNKALCPNWDLCNFIVETATGGDNSKLAIFGLEYMARWIVKGERQRPPIFLSVDEGLVLSAILTAGRSYSSELLGISWAVLDRSLSKKKAPNPESYRGKIYALASLGNLQKAFSTLNEYELAYGDAGPEAEELFCPFTSLHPLVVACSKKGFETLDNVYFQLESLNHAECPYKSVAALNCVILGCANIWDLDRAYQTFESIGSTFGLSPNIHSYNGLMYAFGKLKKTHEASKVFEHLVSLGLKPNAKSYSLLIEAHLINRDVNSALAVVDDMITAGFEPSKEILKMLRRRCVRELDYQSDDRVKSLANSLNYRLGTEARRDILFNLDYSVGYA 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02980 601 Gene3D Tetratricopeptide repeat domain 345 583 IPR011990 GO:0005515
Phco8g02980 601 Pfam Pentatricopeptide repeat domain 127 176 IPR002885 -
Phco8g02980 601 Pfam PPR repeat family 477 523 IPR002885 -
Phco8g02980 601 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 513 547 IPR002885 -
Phco8g02980 601 Gene3D Tetratricopeptide repeat domain 92 294 IPR011990 GO:0005515
Phco8g02980 601 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 165 199 IPR002885 -
Phco8g02980 601 PANTHER OS07G0599000 PROTEIN 1 600 IPR044605 -
Phco8g02980 601 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 478 512 IPR002885 -
Phco8g02980 601 MobiDBLite consensus disorder prediction 40 70 - -
Phco8g02980 601 NCBIfam pentatricopeptide repeat 480 514 IPR002885 -
Phco8g02980 601 NCBIfam pentatricopeptide repeat 168 196 IPR002885 -
Phco8g02980 601 NCBIfam pentatricopeptide repeat 516 548 IPR002885 -
Phco8g02980 601 MobiDBLite consensus disorder prediction 51 68 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02980 8 43794710 43799443 Phco8g02980 8 43794710 43799443 ECH