Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02979 ATGGCTGCCGAGAAAGAGAGAGAGACACAGGTTTACTTGGCCAAACTTGCCGAGCAGGCCGAGAGATACGAAGAAATGGTTGAGTGTATGAAGAAAGTAGCAAAACTTGATCTTGATCTAACTGTGGAAGAAAGGAACCTCCTCTCAGTGGGATACAAAAATGTCATTGGTGCACGGAGGGCCTCCTGGCGCATAATGTCCTCAATTGAGCAGAAGGAAGAGGCTAAGAGTAATGAGCACAATGTCAAACTGATCAAGGGTTACCGCCAAAAAGTCGAGGAGGAACTCTCTAAAATTTGTGGTGACATTCTCACTATTATAGACAAGCACCTGATTCCTTCTACTGCCTCAGCAGAAGCTAGTGTTTTCTACTATAAGATGAAAGGTGATTATTTTCGGTATCTCGCTGAGTTCAAGATTGACCAAGAAAGGAAAGATGCAGCTGAGCAGTCACTGAAAGGATACGAGGCTGCTTCAGCCACTGCAAACACAGATCTTCCATCAACACATCCAATTCGTCTTGGACTTGCACTCAATTTCTCTGTCTTTTATTATGAGATAATGAACTCTCCTGAAAGGGCCTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAATTGGACACCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGCTGTTGAGAGACAACCTGACATTGTGGACCTCTGATTTGCCAGAGGACGGAGGTGAGGACAACACAAAAGCTGAAGAAGCCAAACCTACCGAGCCTGAGCATTGA 780 0.4474 MAAEKERETQVYLAKLAEQAERYEEMVECMKKVAKLDLDLTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEEAKSNEHNVKLIKGYRQKVEEELSKICGDILTIIDKHLIPSTASAEASVFYYKMKGDYFRYLAEFKIDQERKDAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNTKAEEAKPTEPEH 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02979 259 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Phco8g02979 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Phco8g02979 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Phco8g02979 259 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Phco8g02979 259 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Phco8g02979 259 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Phco8g02979 259 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
Phco8g02979 259 MobiDBLite consensus disorder prediction 241 259 - -
Phco8g02979 259 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Phco8g02979 259 SMART 1433_4 7 248 IPR023410 -
Phco8g02979 259 Coils Coil 13 33 - -
Phco8g02979 259 PIRSF 14-3-3 1 251 IPR000308 -
Phco8g02979 259 Pfam 14-3-3 protein 13 235 IPR023410 -
Phco8g02979 259 MobiDBLite consensus disorder prediction 236 259 - -
Phco8g02979 259 Coils Coil 195 215 - -
Phco8g02979 259 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Phco8g02979 259 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Phco8g02979 259 FunFam 14-3-3 protein epsilon 1 249 - -
Phco8g02979 259 Gene3D - 1 248 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02979 Phco-Chr8 43778067 43781096 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02979 8 43778067 43781096 Phco8g02979 8 43778067 43781096 ECH
Phco4g01921 4 38145830 38149016 Phco8g02979 8 43778067 43781096 PCT