Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02000 ATGGACACCCCCGACAAGAAAAGATCTGATTTTGTTGATGTAGTTAGGTCTTGGATCCCTCGAAGGACCGAGCCACCAAATGTGTCGAGGGACTTCTGGATGCCCGATCAGAGTTGTAGGGTCTGCTATGAGTGTGATTCGCAGTTCACGATATTCAACCGCAGACATCACTGTCGAATCTGTGGGCGAGTTTTCTGTGCAAAATGCACTGCCAATTCTGTTCCCGCGCCTTCAGATGAGCCAAATACTGTCCGTGAAGAGTGGGAGAGGATAAGGGTCTGCAACTATTGTTTTAAACAATGGGAAGGGTTAGTAACAATTGATAATAATGGAAGAGCAGATCCTTCGTCAACCCCTTGTCTTAGTCCTTCACCGTCTACAACAAGCTTGGTCAGCACTAAGTCCAGTTGCACCTGTCATAGTAGCAGCAGCACTGCTGGTTCAGTTCCTTATACAACTGGGCCTTATCAGCGTGTGCCTTATAGTCCCCATCAATCTTCGCAAATGAATCAGATAGCTGATGAACAAGATAATTTAAATTCTGGTAGGAGTTCAAATCCCTCCGAGGCTGTAGGGAATTTGACTTCTAACCAATTTGGCTATTGCTTCAACAGGAGTGATGATGAGGATGATGATTATGGTGTTTATCATTCGGATATAGAATCAAGACATTATTCTCATGCGCATGACTTCGAAGTTCCAGTTAACATTCATGGGGTTGAACATGTCTACGGGCCACATCAAATGCATCCTGATGAAGCTAGCATTCATGAAAAGAGCTTGAGTTGCCTAACGCCACCACAGAATCTTGATCTAGAAGGTGTAGATGGAATTCAAGCACCTGGTAAAGAAGCTGATGAGCATGATCATGCTGATGGATGTGAAACTTCTCCTTATCATGAAGAGAGCAATAATACAGATCCTGTGGATTTTGAGAGTAATGGACTACTATGGCTACCTCCTGAGCCAGAAGATGAAGAGGATGATAGAGAAGCTGTTCTTTTCGATGATGATGAGGATGAAGGTACTACTGGAGGAGGGGAATGGGGATATCTACAATCCTCCACTAGTTTTGGCTCTGGAGAATGTCGTAGCAGAGATAAAACAAGTGAGGATCATAGGAAGGCCATGAAGACTGTAGTGGAAGGGCATTTCAGAGCTCTGGTCACTCAGCTCTTACAAGTGGAAAACCTAACTATTTGTGATGAAGATGGAAAAGAGAGTTGGTTGGATATAATTACCGCTTTGTCTTGGGAAGCTGCTACAATTCTGAAGCCCGATATGAGCAGAGGTGGAGGTATGGATCCTGGTGGATATGTAAAGGTTAAATGCATAGCTTGTGGACATCGAAATGAAAGCATGGTGGTTAAAGGAGTTGTATGTAAAAAGAATGTGGCTCATCGGAGAATGACATCAAAAATTGATAAACCACGTTTTCTAATACTTGGAGGTGCTTTGGAGTATCAGCGTGTTTCTAACCAGTTATCAAGTGTTGATACTTTGTTACAGCAGGAGATGGACCATTTGAAGATGGCAGTTGCAAGGATTGATGCTCATCACCCCAATGTGCTTTTGGTGGAGAAGTCAGTATCTCGTTATGCTCAAGATTACCTTCTAGCTAAAGACATATCACTTGTTTTGAATATCAAAAAGCCACTTTTAGAGCGCATTGCCCGTTGTACTGGTGCACAGATTGTCCCTTCAATTGATCATCTGACCTCTCAAAAGCTGGGATATTGCGAAACATTCCATGTGGACAAATTTTTTGAGGAGCATGGTAGTGCTGGGCAAGGTGGGAAAAAATCAACAAAGACTTTGATGTTCTTTGAGGGTTGTCCGAAACCTTTAGGTTGCACTGGTGCCAATGGGGACGAGTTGAAGAAGGTGAAACATGTGATCCAATATGGAGTCTTTGCAGCCTATCACCTGGCACTAGAGACATCTTTTCTGGCTGATGAAGGTGCTTCACCACTAGAGTTTCCTTTGAAATCTCCCATAACTGTTGCATTACCAGATAAACCATCTAGTATTGTGAGATCCATTTCCACTATCCCTGGATTTTCTGTTCTCTCTGCTAGAGAGTCTCAGGGAGCAAAACCTTTTGAAATACCAAAATCTGTTGACATCCACAAGACAGAAAGAATCCCATCTAGCTGCAGTGAGTCCACTGAAAGATCATTGGTTGGTGACTCAATCAATATGCATGAAGTCTCGGGAGTTGCCATCCAATCAGCTCAGGATATGCCATCTTCCCTCTGCAAAAGTTTCCTTTCGAACACTGCTTCTAAGGAAGATGATTCTTTTGGAACATTTGACTCTTCACAACAAGATGGCAATAGCTACCTCAGAGCTGCAGAATTATATGCTAATCAGGGCCCTAGCTTTGGGCCACCATATATAAAACATGATACTAATAATAGTAATAACAATAATGATCATGAGGACATGGTACATTCAAACGAAGATTTTCCTCCCTCAACTTCTGACCATCAGAGTATTTTAGTCTTTTTATCAACGCGTTGTGTATGGAAAGGAACTGTTTGTGAAAGGTCCCATCTTGTCAGAATTAAATACTATGGAAGTTCTGATAAGCCTTTGGGACGGTTCTTGAGAGATCAACTACTTGATCAGAGTTACACCTGCTGCTCATGTGAGTCGCCACCAGAAGCCCATGTTCATTGTTATACTCATCGGCAAGGCAGCCTGACAATTTCTGTTAAGAAACTATCGGATTTTGATTTACCAGGGGAACGAGAAGGTAAAATTTGGATGTGGCACAGATGCCTGAAATGTCCTCGTGTAAATGGTTTTCCTCCTGCTACACGGAGAGTAGTTATGTCTGATGCTGCCTGGGGCTTATCCTTTGGGAAATTTTTGGAGCTGAGTTTTTCAAATCATGCAGCAGCAAGCAGGGTTGCAAGTTGTGGTCATTCGCTTCACAGAGATTGTTTAAGATTCTACGGTTTTGGGAAGATGGTTGCCTGCTTTCGTTATGCTTCAATTCACCTTCATTCTGTTTATCTTCCTCCACCTAAACTTGAATTCATCAACTATGATAGGCAGGACTGGCTACTAAAAGAAGCGTATGAGCTGCATGACAAGGCTGAATTACTGTTTGGTGAAGTGGGCACCATTCTGCATCAAAATTCAGAGAAGGTTTCAGGTCTTGTGTTGCAAGAGGGTGCACATAGGGTGTCAGATTTTAGGAATCTAATTGTGGAACTTAAAGAGATGCTGCAGTATGAGAAAGAAGAATTTGAGGACTCATTACGAAAAATGCTGCATAGAGAAGCCAAAGCTGAACTGCCTGTGATTGATATTCTAGAGCTCAATAAGTTGCGCAGGCATATCCTTATCCATTCTTATGTTTGGGACCAGCGCTTGATATATGCATACAATCTAAGTAAAAGTATTGTTCAAGAAAATTCAAAGATCTTAAATCATAGAGAAAAGTTGCTTAGTCCCAGGGAAAAACTTGTTGAAGCTGATATTGCCACTAGGCCAGCAAGAGGCTATAGCAGTTCCGATTCCTTTCTTTTGGAAACAAAACCTGATGGAAATCTAAATTTAGAAAACACTAGTCCCCTGAGCCGCCCTGGTGAGGTGATTAAATGTGACGACAAGGTTAAAGATACAAATCATGATAAGGTTGACCTTTCTCTCTCTGGTTGTGCAAATATCAATGATAGATCTGATTCTGTAGAATTCGGGGGGTCTGTAAGGAGGGCTTTGTCCCAGGGGGAATCTTCTGTTGTGGTCAACTTATCTGATACCCTTGATGCAGCATGGACAGGTGAAAGTCACCCTACAATTTCATCACTCAAAGAAAATGGTTGTCAATCTCCTGATATGTCTGTTCATTCACCTGTGGCAAATACAGTTTCGTCAAAATCAAATTCTGGTAACTATAATGCTGATATTGGTGGGATTGAGGCAGGATGCACTAATCACTCTAGAATACTTTCCAAAGGACTTGATACTAAATGGAAAGCAATGCCTTTTGCAAACTTCTTTGGTTCATTCAACAAAACTTCTTCCTTCAATATACAGAAGCTTGTTGAGTATAACCCAGTTCATATTTTATCATTTCGAGAGGTGGAGCGCCAGACTGGTGCTAGACTGCTTCTGCCAGCTGGAACTAGTGATACCATAGTGCCCGTTTATGATGATGAACCCACCAGTGTTATAGCGTATGTGCTTGTGTCAGTGGATTATCATATGCAGATGTCAGAATTTGATAGACCTAAAGACAGTGGAGATAGTTCAATTTCATTGCCGCTCTTTGATTCAAGTATACTTTCTCTTAACTCTTTTGATGAGACACTTACTAATACATACAGAAGTCTTGGCTCTTTTGATGAAAGCATGTTATCCACTTCTGGGTCTCGGAGTTTACCGGCTGGGGATCCACCCTCATACACAAAGGATTTTCATGCAAGGGTTTCTTTTACTGACGATAGCTCCCTTGGGAAAGTGAAATATACTGTAACTTGCTACTACGCAAAGAGATTTGAGGCTTTAAGAAGGACTTGTTGCCCTTCTGAGTTAGATTTTGTGCGGTCCCTTAGCCGTTGTAAGAAGTGGGGGGCTCAGGGAGGAAAGAGCAATGTTTTCTTTGCAAAAACCCTGGATGATAGGTTTATCATCAAGCAGGTTACAAAAACAGAGCTTGATTCATTTACCAAGTTTGCACCAGCATATTTTAAGTATTTATCTGAGTCAATCAGTACAGGAAGCCCAACTTGTCTTGCGAAGATCTTGGGAATTTATCAGGTAACATCGAAGTACCTCAAAGGAGGGAAGGAAACAAAAATGGATGTTTTGGTTATGGAAAATCTTCTTTACAGACGAAACATTAGGCGGCTTTATGACCTCAAAGGTTCTTCCCGATCACGGTACAATCCAGATACAAGTGGGAGCAATAAAGTGCTGCTGGATCAGAATCTCATTGAAGCTATGCCAACCTCTCCAATATTTGTTGGGAACAAGGCAAAACGGTTGCTAGAGAGGGCTGTGTGGAATGATACTGCCTTCCTTGCATCAATATATGTTATGGACTACTCATTGCTGGTTGGCGTTGATGAGGAAAAACATGAGCTGGTATTAGGTATAATTGATTTCATGAGGCAGTATACATGGGATAAACACCTTGAAACATGGGTGAAGACCTCAGGCATCCTTGGTGGAGACAAGAATACTTCTCCAACTGTTATATCACCGCAGCAGTACAAGAAACGGTTTAGGAAAGCCATGAGTTTATATTTTCTTATGGTGCCAGATCAATGGTCTCCTCCAGAGTTACACCCCAGTGGGTCCCAATCTGACATTTATGACGATAATGCATAG 5346 0.4199 MDTPDKKRSDFVDVVRSWIPRRTEPPNVSRDFWMPDQSCRVCYECDSQFTIFNRRHHCRICGRVFCAKCTANSVPAPSDEPNTVREEWERIRVCNYCFKQWEGLVTIDNNGRADPSSTPCLSPSPSTTSLVSTKSSCTCHSSSSTAGSVPYTTGPYQRVPYSPHQSSQMNQIADEQDNLNSGRSSNPSEAVGNLTSNQFGYCFNRSDDEDDDYGVYHSDIESRHYSHAHDFEVPVNIHGVEHVYGPHQMHPDEASIHEKSLSCLTPPQNLDLEGVDGIQAPGKEADEHDHADGCETSPYHEESNNTDPVDFESNGLLWLPPEPEDEEDDREAVLFDDDEDEGTTGGGEWGYLQSSTSFGSGECRSRDKTSEDHRKAMKTVVEGHFRALVTQLLQVENLTICDEDGKESWLDIITALSWEAATILKPDMSRGGGMDPGGYVKVKCIACGHRNESMVVKGVVCKKNVAHRRMTSKIDKPRFLILGGALEYQRVSNQLSSVDTLLQQEMDHLKMAVARIDAHHPNVLLVEKSVSRYAQDYLLAKDISLVLNIKKPLLERIARCTGAQIVPSIDHLTSQKLGYCETFHVDKFFEEHGSAGQGGKKSTKTLMFFEGCPKPLGCTGANGDELKKVKHVIQYGVFAAYHLALETSFLADEGASPLEFPLKSPITVALPDKPSSIVRSISTIPGFSVLSARESQGAKPFEIPKSVDIHKTERIPSSCSESTERSLVGDSINMHEVSGVAIQSAQDMPSSLCKSFLSNTASKEDDSFGTFDSSQQDGNSYLRAAELYANQGPSFGPPYIKHDTNNSNNNNDHEDMVHSNEDFPPSTSDHQSILVFLSTRCVWKGTVCERSHLVRIKYYGSSDKPLGRFLRDQLLDQSYTCCSCESPPEAHVHCYTHRQGSLTISVKKLSDFDLPGEREGKIWMWHRCLKCPRVNGFPPATRRVVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVACFRYASIHLHSVYLPPPKLEFINYDRQDWLLKEAYELHDKAELLFGEVGTILHQNSEKVSGLVLQEGAHRVSDFRNLIVELKEMLQYEKEEFEDSLRKMLHREAKAELPVIDILELNKLRRHILIHSYVWDQRLIYAYNLSKSIVQENSKILNHREKLLSPREKLVEADIATRPARGYSSSDSFLLETKPDGNLNLENTSPLSRPGEVIKCDDKVKDTNHDKVDLSLSGCANINDRSDSVEFGGSVRRALSQGESSVVVNLSDTLDAAWTGESHPTISSLKENGCQSPDMSVHSPVANTVSSKSNSGNYNADIGGIEAGCTNHSRILSKGLDTKWKAMPFANFFGSFNKTSSFNIQKLVEYNPVHILSFREVERQTGARLLLPAGTSDTIVPVYDDEPTSVIAYVLVSVDYHMQMSEFDRPKDSGDSSISLPLFDSSILSLNSFDETLTNTYRSLGSFDESMLSTSGSRSLPAGDPPSYTKDFHARVSFTDDSSLGKVKYTVTCYYAKRFEALRRTCCPSELDFVRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELDSFTKFAPAYFKYLSESISTGSPTCLAKILGIYQVTSKYLKGGKETKMDVLVMENLLYRRNIRRLYDLKGSSRSRYNPDTSGSNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIYVMDYSLLVGVDEEKHELVLGIIDFMRQYTWDKHLETWVKTSGILGGDKNTSPTVISPQQYKKRFRKAMSLYFLMVPDQWSPPELHPSGSQSDIYDDNA 1781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02000 1781 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Phco8g02000 1781 Pfam TCP-1/cpn60 chaperonin family 405 597 IPR002423 GO:0005524
Phco8g02000 1781 CDD Fab1_TCP 386 654 - -
Phco8g02000 1781 Gene3D GroEL 451 620 IPR027409 -
Phco8g02000 1781 SMART PIPK_2 1465 1756 IPR002498 GO:0016307|GO:0046488
Phco8g02000 1781 MobiDBLite consensus disorder prediction 805 824 - -
Phco8g02000 1781 SUPERFAMILY FYVE/PHD zinc finger 31 105 IPR011011 -
Phco8g02000 1781 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Phco8g02000 1781 SUPERFAMILY SAICAR synthase-like 1490 1755 - -
Phco8g02000 1781 MobiDBLite consensus disorder prediction 158 191 - -
Phco8g02000 1781 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1434 1755 IPR002498 GO:0016307|GO:0046488
Phco8g02000 1781 CDD PIPKc_PIKfyve 1492 1755 IPR044769 GO:0000285
Phco8g02000 1781 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 22 1765 - -
Phco8g02000 1781 SMART fyve_4 28 103 IPR000306 GO:0046872
Phco8g02000 1781 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1458 1612 IPR027484 -
Phco8g02000 1781 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 451 621 - -
Phco8g02000 1781 MobiDBLite consensus disorder prediction 337 372 - -
Phco8g02000 1781 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1698 1752 IPR002498 GO:0016307|GO:0046488
Phco8g02000 1781 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1531 1697 IPR002498 GO:0016307|GO:0046488
Phco8g02000 1781 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 105 IPR013083 -
Phco8g02000 1781 SUPERFAMILY GroEL apical domain-like 452 619 IPR027409 -
Phco8g02000 1781 MobiDBLite consensus disorder prediction 1276 1298 - -
Phco8g02000 1781 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 1457 1612 - -
Phco8g02000 1781 MobiDBLite consensus disorder prediction 137 191 - -
Phco8g02000 1781 MobiDBLite consensus disorder prediction 285 312 - -
Phco8g02000 1781 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 24 108 - -
Phco8g02000 1781 Gene3D - 1614 1756 - -
Phco8g02000 1781 MobiDBLite consensus disorder prediction 137 152 - -
Phco8g02000 1781 MobiDBLite consensus disorder prediction 348 363 - -
Phco8g02000 1781 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1614 1756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02000 Phco-Chr8 21365484 21375155 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02000 8 21365484 21375155 Phco8g02000 8 21365484 21375155 ECH
Phco8g02000 8 21365484 21375155 Phco4g01791 4 33641776 33649480 PCT