Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01452 ATGGCACAAGATACTGTTTTTGGTGCTGACTCACCTCGACGACGTCTATTGCGAGATCAGGTTCAAGTGGTTAAAAGAAAGGATTCTGATCGCTATGAAATTGTTCCTATCCAAGATTCCCTGTCATTTGAGAAAGGATTTTTCATATTTATTCGTGCGTGCCAATTGCTGGCTCAAAAGAATGATGGAATCATATTAGTCGGAGTTGCAGGTCCATCTGGAGCAGGGAAAACTGTTTTCACTGAGAAGATCCTCAATTTTATGCCAAGCATAGCTGTCATAACAATGGACAATTATAATGATTCTAGTAGAGTTATTGATGGAAACTTTGATGACCCTCGGTTGACGGATTATGATACCTTGCTTGAAAATATACAGGGTCTTAAAGCAGGGAAGCCTGTTCAAGTTCCAGTATATGATTTCAAGTCTAGTTCTCGCATAGGTTACAGGACTGTTGAAGTCCCAAGCTCTCGTATTGTAATCATAGAAGGCATCTACGCCTTAAGTGAAAGGTTAAGGCCTTTGCTTGATCTTCGTGTTTCTGTTACTGGTGGAGTACATTTTGACCTTGTTAAGCGTGTATTACGGGACATTCACCGTGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATCTCTGAAACGGTATATCCTATGTATAAAGCTTTCATTGAGCCAGATCTCCAAACAGCACATATAAAAATCATTAACAAGTTTAATCCATTCTCTGGATTTCAGAATCCGACATACATATTGAAGTCAGCCAGAACTGTGACAGTTGAGCAAATCAAGGAAATTATTGCTGCCCAGCATACTGAAACCAAAGAGGAAACGTATGACATATTTCTTCTACCGCCTGGTGAAGACCCTGAAGCCTGTCAATCATATTTGAGAATGAGAAACCGCGATGGAAAGTACAATCTCATGTTTGAGGAATGGGTGACTGATAGTCCATTCATAATATCTCCTAGAATTACTTTCGAGGTCAGTGTGCGCCTTCTTGGGGGGCTGATGGCCTTAGGATACACAATTGCATCTATCCTGAAAAGAAGCAGCCATATCTTTCATGATGATAAAGTGACCATAAAAACTGATTGGTTAGAACAACTTAATCGCACATATGTTCAGGTGCAAGGGAAGGACAGGAACTATTGCAAGTTTGTAGCAGGGAAACTGGGGTTGGATGGTTCCTATGTTCCTCGCACTTATATTGAACAAATTCAGCTAGAAAAGCTTGTGAATGATGTGATGGCATTGCCAGACGATCTTAAGTCAAAACTCAGCTTAGATGATGACTTAGTTTCAAGCCCCAAAGAAGCCCTTTCCAGAGCTTCTGCAGATAGGAGAATGAAGTATCTTAGTCGTGGTATTTCACACTCATATTCGACTCAAAGGGACAAGATTCTACCTAAGCTGACTAAACTTGCTATAAATAACAGAAGATTCGATGGAAGAGCTCTTGAATCACCTGCATCAATTGCTAACCATGGGGTCATCACTCAACTTTCTGATCAAATTTCCACATTAAATGAAAGAATGGATGAATTCACCTCCCGTATTGAAGAATTGAATTCAAAGTTTACTAGCAAAACAGTTTCTGCCAGTCAACAAAACTTGGCTTCACAGGCTGAGGCCAGTAATGGCTCAGGCCCCACTTCCTTGTTTGCAACTGGATTAGGCAATGGTTCATTGACTGGATCATTGCTGCCTAATTCTTCATCATCTTCTCAATTGGCGAAAGAATCTCCCCTGATGGACGAGGTGTTAGTTATTGCACGGGGACAACGTCAAATCATGCATCAAGTAGACACTCTGAGCAATCTTTTGCATGAATACTTTGGAGAACGGTCACGCCTTGGAAGACCAAATCAAACAGGTAGAATGCGTGAACCTGAATCTGTTGCCATCCCTATGGTTCTGACTCTGGTCATTGGTGTGGTTGGTGTGTTGTTGTTCAAGGGTGTGACATCCCAAAAGTAG 1980 0.4121 MAQDTVFGADSPRRRLLRDQVQVVKRKDSDRYEIVPIQDSLSFEKGFFIFIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKILNFMPSIAVITMDNYNDSSRVIDGNFDDPRLTDYDTLLENIQGLKAGKPVQVPVYDFKSSSRIGYRTVEVPSSRIVIIEGIYALSERLRPLLDLRVSVTGGVHFDLVKRVLRDIHRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPTYILKSARTVTVEQIKEIIAAQHTETKEETYDIFLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIASILKRSSHIFHDDKVTIKTDWLEQLNRTYVQVQGKDRNYCKFVAGKLGLDGSYVPRTYIEQIQLEKLVNDVMALPDDLKSKLSLDDDLVSSPKEALSRASADRRMKYLSRGISHSYSTQRDKILPKLTKLAINNRRFDGRALESPASIANHGVITQLSDQISTLNERMDEFTSRIEELNSKFTSKTVSASQQNLASQAEASNGSGPTSLFATGLGNGSLTGSLLPNSSSSSQLAKESPLMDEVLVIARGQRQIMHQVDTLSNLLHEYFGERSRLGRPNQTGRMREPESVAIPMVLTLVIGVVGVLLFKGVTSQK 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01452 659 CDD UMPK_like 66 238 - -
Phco8g01452 659 Pfam Phosphoribulokinase / Uridine kinase family 67 235 IPR006083 GO:0005524|GO:0016301
Phco8g01452 659 SUPERFAMILY CYTH-like phosphatases 258 406 IPR033469 -
Phco8g01452 659 PRINTS Uridine kinase signature 223 236 - -
Phco8g01452 659 PRINTS Uridine kinase signature 64 81 - -
Phco8g01452 659 PRINTS Uridine kinase signature 187 197 - -
Phco8g01452 659 PRINTS Uridine kinase signature 131 146 - -
Phco8g01452 659 Gene3D - 65 244 IPR027417 -
Phco8g01452 659 Gene3D - 252 412 - -
Phco8g01452 659 ProSiteProfiles CYTH domain profile. 247 409 IPR023577 -
Phco8g01452 659 Pfam CYTH domain 268 403 IPR023577 -
Phco8g01452 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 235 IPR027417 -
Phco8g01452 659 Coils Coil 499 526 - -
Phco8g01452 659 PANTHER URIDINE KINASE 17 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01452 Phco-Chr8 15004972 15016068 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01452 8 15004972 15016068 Phco8g01452 8 15004972 15016068 ECH
Phco4g01814 4 34880801 34909952 Phco8g01452 8 15004972 15016068 PCT