Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00065 ATGGAGATCATTGCTCTTTTCTTATGCATTTTCCTCTTCTTCTCATCCCTTCTTTCCTATCCATTAATAAAGAAACACAAGAAACTCCAACAGATACCTAAGCCTAAGCTTCCACCTGGCTCAATGGGTTGGCCTTACGTAGGAGAGACCCTTCAACTCTATTCTCAGGACCCTAACATCTTCTTTGCTTCTAAGCAAAAAAGATATGGAGAAATCTTTAAGACACGCATACTAGGTTGTCCATGCGTGATGTTGGCCAGTCCCCAGGCTGCACGTTTTGTGTTGGTGACTCATGCTCACTTGTTCAAGCCTACATACCCCAAAAGCAAAGAGAAGCTAATAGGCCCTTCTGCATTGTTCTTTCACCAAGGAGAATATCACACTCGCATCAGGAAGCTGGTGCAAACCTCTCTTTCTCCTGAAAGCATTAGAAAACTCATCCCAGACATCGAAACCGAGGTTGTTTCCTCCTTGGAATCGTGGGTTTCCGCTGGACAAGTCATTAACCCTTTCCAAGAAATGAAAAAGTTCTCTTTCAATATTGGCATCCTCTCTGTCTTTGGTCACTTGGAACGCAAATATAGAGACCAGCTTAAGGAAAACTACAGCATAGTAGAGAAAGGGTACAACTCTTTTCCAAACAGGATACCTGGAACTGCATACTCAAAAGCGCTTCTGGCAAGGAGGAGAATTAGAGAGATTATAAGTGAGATCATCTCTAAGAGAAAGGAGCAGAGATTGGTGGATAAGGATCTGTTAGGCCACTTGCTGAACTACAAGGATGAAAAGGGACAAATGCTAAGTGACGACCAAATTGCTGATAATGTAATTGGGGTACTATTTGCAGCTCAGGATACTACAGCAAGTGTTCTAACATGGATTCTCAAGTATCTTCACGATGACCAGAAACTTCTTGAAGCAATAAAAGCAGAGCAAATGGCAGTGTGTGAAGCTAATGAAGAAGGGAAGAAGCCATTGACATGGAGTCAGACCAGAAATATGCCAATTACTCATAGGGTAATTTTGGAAAGCCTTAGGATGGCAAGTATCATATCATTTACTTTTAGGGAAGCAGTGGTTGATGTGGTATACAAAGGATATCTTATACCCAAGGGTTGGAAAGTGATGCCACTGTTCAGGAACATCCATCATAATCCAGAATTCCACCCTTCTCCTCACAATTTTGACCCATCAAGGTTTGAGGTTGCTCCAAAGCCCAATACTTTCATGCCATTCGGCAATGGAGTGCATTCTTGTCCAGGAAATGAGCTTGCCAAATTGAACATGTTCATTTTAATTCATCATCTAGTAACAAAGTACAGGTGGGAGGTTGTGGGATATCAGAACGGAATCCAATATAGCCCATTCCCAGTTCCTCTGTATGGTCTACCAACAAGATTTTGGAGAAACCAATTGAATCAAATATGA 1428 0.4188 MEIIALFLCIFLFFSSLLSYPLIKKHKKLQQIPKPKLPPGSMGWPYVGETLQLYSQDPNIFFASKQKRYGEIFKTRILGCPCVMLASPQAARFVLVTHAHLFKPTYPKSKEKLIGPSALFFHQGEYHTRIRKLVQTSLSPESIRKLIPDIETEVVSSLESWVSAGQVINPFQEMKKFSFNIGILSVFGHLERKYRDQLKENYSIVEKGYNSFPNRIPGTAYSKALLARRRIREIISEIISKRKEQRLVDKDLLGHLLNYKDEKGQMLSDDQIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMAVCEANEEGKKPLTWSQTRNMPITHRVILESLRMASIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFHPSPHNFDPSRFEVAPKPNTFMPFGNGVHSCPGNELAKLNMFILIHHLVTKYRWEVVGYQNGIQYSPFPVPLYGLPTRFWRNQLNQI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00065 475 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco8g00065 475 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco8g00065 475 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco8g00065 475 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco8g00065 475 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco8g00065 475 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco8g00065 475 Pfam Cytochrome P450 38 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco8g00065 475 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco8g00065 475 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco8g00065 475 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco8g00065 475 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco8g00065 475 FunFam Abscisic acid 8 26 469 - -
Phco8g00065 475 CDD CYP90-like 66 466 - -
Phco8g00065 475 Gene3D Cytochrome P450 26 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco8g00065 475 SUPERFAMILY Cytochrome P450 33 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco8g00065 475 PANTHER CYTOCHROME P450 26 35 457 - -
Phco8g00065 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00065 Phco-Chr8 569650 572405 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00065 8 569650 572405 Phco8g00065 8 569650 572405 ECH
Phco2g00259 2 1994076 1998579 Phco8g00065 8 569650 572405 ECH