Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02888 ATGGTTCCTTCACCAACGTTAACCCTCTCCCAAGTGTCTGTGTCTCTTTTTCTGCTCTTCTTCGCGTCACTTTCTTCTTCCTATGCAACTTCTCGCCTCACCCACAACCATGCCAACTCACAATCACCAGCACAAAAGCTCATAAGAAGCTTCAACCTGTTCCCAAAGTACCCAATAAACACTGTCAAAGGTGACCGTGAAGCTTTTGTTTCAGGGAAGATCGTGGAGAAGAAGTTTTCGTTTCTTGGTGATTCTGGACCTTCTATTCAAGACCTTGGTCACCATGCAGGTTACTATTCACTCCCCAGTTCCAAAGCTGCAAGGATGTTTTACTTTTTCTTTGAGTCAAGGAACAGCAAGGATGACCCCGTTGTGATATGGTTAACTGGAGGACCAGGGTGTGGCAGTGAACTGGCTTTGTTTTATGAGAATGGCCCTTTTCATATTGCCAATAATTTGTCTCTTTTATGGAATGATTACGGTTGGGACCAGGCATCAAATATTTTATTTGTTGACCAACCTACAGGTACAGGTTTTAGTTACACTTCTGATGATAGTGACATTCGTCATGATGAAACTGGTGTTAGCAATGATTTATATGACTTCTTGCAGGAGTTTTTCAAGGCACATCCTGAGTTCGTTAAGAATGACTTTTATATCACTGGAGAATCATATGCTGGACACTATGTTCCTGCTATTGCATCCCGGGTTAACCAAGGAAACAAAGAAAATCAAGGAATTCATATAAACCTTAAGGGTTTTGCAATTGGTAATGGGTTAACAAATCCAGCAATTCAGTTCCAAGCATACCCAGACTTTGCATTAGATAATGGAATTATCACAAAGGCTGAACATGATAATATAAGCAAGTTAATCCCTGACTGTGAACAAGCTGCTAAAACTTGTGAAACTCAAGGTGGAAGTGGTTGTGACAATGCATTGAATATTTGTATGAACATATTCGACAGTATATTGTCCATTGCTGGGGACATTAACTACTACGACATCAGAAAGAAGTGTTTGGGGGAACTGTGCTATAATTTCAGCAACGTGGAGACTTTGTTAAACCTGCAGAAAGTGAAGAGTGCTTTAGGTGTGGGGAGTGACTTGGATTATGTTTCATGCAGTGCAACAGTGTACAGTGCTATGATTCAAGATTGGATGAAAAATCTGGAAGTGGGGATTCCTGCTCTTCTTGAGGATGGAATCAAGGTACTTGTGTATGCAGGGGAATACGATCTCATATGCAACTGGCTAGGAAATTCAAGGTGGGTTCATGCAATGGAGTGGTCAGGCCAAAAGGCGTTTGGAACATCTCCTACAGTGAAATTTGTTGTTGAGGGTGTAGATTCAGGGTCTTTGAACAGCTATGGACCTCTCTCTTTTCTCAAGGTCTATGGGGCTGGGCATATGGTTCCTATGGATCAACCAAAAGCTGCACTTGAGATGTTGAAAAGCTGGATGGGAGGGAAACTGACCACACAAAGAGATAATTAG 1497 0.4175 MVPSPTLTLSQVSVSLFLLFFASLSSSYATSRLTHNHANSQSPAQKLIRSFNLFPKYPINTVKGDREAFVSGKIVEKKFSFLGDSGPSIQDLGHHAGYYSLPSSKAARMFYFFFESRNSKDDPVVIWLTGGPGCGSELALFYENGPFHIANNLSLLWNDYGWDQASNILFVDQPTGTGFSYTSDDSDIRHDETGVSNDLYDFLQEFFKAHPEFVKNDFYITGESYAGHYVPAIASRVNQGNKENQGIHINLKGFAIGNGLTNPAIQFQAYPDFALDNGIITKAEHDNISKLIPDCEQAAKTCETQGGSGCDNALNICMNIFDSILSIAGDINYYDIRKKCLGELCYNFSNVETLLNLQKVKSALGVGSDLDYVSCSATVYSAMIQDWMKNLEVGIPALLEDGIKVLVYAGEYDLICNWLGNSRWVHAMEWSGQKAFGTSPTVKFVVEGVDSGSLNSYGPLSFLKVYGAGHMVPMDQPKAALEMLKSWMGGKLTTQRDN 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02888 498 FunFam Carboxypeptidase 81 498 - -
Phco7g02888 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 181 IPR001563 GO:0004185|GO:0006508
Phco7g02888 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 460 473 IPR001563 GO:0004185|GO:0006508
Phco7g02888 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 206 231 IPR001563 GO:0004185|GO:0006508
Phco7g02888 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 170 IPR001563 GO:0004185|GO:0006508
Phco7g02888 498 Gene3D alpha/beta hydrolase 74 498 IPR029058 -
Phco7g02888 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 88 477 IPR001563 GO:0004185|GO:0006508
Phco7g02888 498 ProSitePatterns Serine carboxypeptidases, serine active site. 220 227 IPR018202 GO:0004185
Phco7g02888 498 SUPERFAMILY alpha/beta-Hydrolases 93 491 IPR029058 -
Phco7g02888 498 ProSitePatterns Serine carboxypeptidases, histidine active site. 460 477 IPR033124 GO:0004185
Phco7g02888 498 Pfam Serine carboxypeptidase 91 489 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02888 Phco-Chr7 47860029 47863292 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02888 7 47860029 47863292 Phco7g02888 7 47860029 47863292 ECH