Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02390 ATGCAATCTCAAACTTCAGATACGTTTCACTCTCACTATGGGAATGAACCAATTTCCTATTATGACCCAGCATTTTACTACACCAGGCCCTTTTCCATTGACTCTGAAAGCAACCCAACATCAAAACAAGAAAACAACCCTGACCTTCCTCCTTTGTCCTTTTTCCACTTTCCTTCTCCTCCCTTTGAAGATGCTCAAATTTTCCTCGAACAACACCAAGATTTTCTCCTTCAGTTTCACCATATACCTCTACCTCAAGACCCCGAGCCTCAACCAGTTAGTATTGCCGTGGAGGCTTCTGCTAAAAAGAGTAATCAGATCCCCAGAAAAAGACTCGGCAAGAGAGATAGACACAGCAAGATTAACACCGCAAGAGGACTGAGGGATAGGAGAATGAGACTTTCCCTTGATGTTGCAAAGAGGTTTTTCGGCTTGCAAGATATGCTAGGCTTTGAGAAAGCTAGCAAGACCGTGGAGTGGCTACTGAACCAAGCAAAAGTTGAAGTCAATCGTCTAGCGAAGGAGAAAAGGAAGCAGAAGAAGAATGTTCACCACAGTTGCAGCAGTGCTAGTTCGGAATGTGAAGAAGGGGTGTCTAGTCTTGATGAGGTTGTAGTGAGTAGAGATGAAGAACAAGCAGGAGAAGAGAGAGTGGAGAAAGTGATGAAGAGAAGGGTTAAGCTTTCTAGGAAGATCAGTGCATTCCATCCTCTTGCAAAGGAGTGCAGGGAAAGGGCAAGAGAGAGGGCAAGAGAGAGGACGAGAGAAAAGATGAGAAGTCGTGGCCTAGCTGAAGAATCAAAGCCATGTAGAGAAGAAAGAAATCAAAATCTGATCCAATTGGGTTCCTGGAACCCCTCGGAAGCTGGAGAAGAATTTGGTACCAAGAGCCATATTGTACATCCTTCCTTGAACGTTATCACTGAGGGTAAAGAACAATGCTACTACGCAAAGGAGCAAGACGATGATTCTTTGGTTATTTTGAGCAAATGGAGCCCCTCCTTGATCTTCAATGAATTCTCTCAAGAACACCAATTTGCAGAGTTTCAGTCCTTGGGAAAACCTTGGGAGGCCTAA 1077 0.4429 MQSQTSDTFHSHYGNEPISYYDPAFYYTRPFSIDSESNPTSKQENNPDLPPLSFFHFPSPPFEDAQIFLEQHQDFLLQFHHIPLPQDPEPQPVSIAVEASAKKSNQIPRKRLGKRDRHSKINTARGLRDRRMRLSLDVAKRFFGLQDMLGFEKASKTVEWLLNQAKVEVNRLAKEKRKQKKNVHHSCSSASSECEEGVSSLDEVVVSRDEEQAGEERVEKVMKRRVKLSRKISAFHPLAKECRERARERARERTREKMRSRGLAEESKPCREERNQNLIQLGSWNPSEAGEEFGTKSHIVHPSLNVITEGKEQCYYAKEQDDDSLVILSKWSPSLIFNEFSQEHQFAEFQSLGKPWEA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02390 358 ProSiteProfiles TCP domain profile. 114 172 IPR017887 -
Phco7g02390 358 Coils Coil 162 182 - -
Phco7g02390 358 Pfam TCP family transcription factor 113 260 IPR017887 -
Phco7g02390 358 MobiDBLite consensus disorder prediction 245 272 - -
Phco7g02390 358 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 91 356 IPR005333 GO:0003700
Phco7g02390 358 ProSiteProfiles R domain profile. 240 257 IPR017888 -
Phco7g02390 358 MobiDBLite consensus disorder prediction 100 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02390 Phco-Chr7 41810660 41812233 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco7g02390 TCP 4.3e-43 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02390 7 41810660 41812233 Phco7g02390 7 41810660 41812233 ECH
Phco7g02390 7 41810660 41812233 Phco8g01492 8 15343161 15344658 ECH
Phco7g02390 7 41810660 41812233 Phco3g03040 3 56532524 56533726 ECH