Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01443 ATGGCCCTGTCAACTCCACACATGCAAAGATTCCACTTATGCAAGCTCCATACTCGCTCCACCTCTAAGACCACACACAAAAACACCTTCACCACCACCACCAGGGGCCGGTGCTGCTCTGCCATAGCCATCGATGCTCCATCGTCTTTGACTGAGGTGCCCGGTGTAAGATGGGGGTCCATAGCCTTGCAGGGTCTTCGTGAAGAGATGGAGGATGACATCATTGTTCGACCCGATGGCCTTCAGGGCTTCTCTTTCGCGGCGGTCTTCGATGGCCATGGAGGGTTTTCTTCTGTCGAGTTCCTCAGGGATGAGCTCTACAAGGAGTGTGTTGAAGCTTTACAAGGTGGATTACTATTAGTGCAGAAAGATTTCAAAGCCGCTAAAGGAGCATTGCAGGAGGCATTTCTCAAGGCAGATACGAGGTTATTAAAACGGCTTGAAATGAATGGAGAGGAGGATGAATCAGGTGCTACAGCAACTGCCGTTTTCATCGGAGATGATGAGCTTCTAATTTCACACATCGGTGACTCCTCTGCGGTTCTATGCAGATCTGGAAAAGCAGAAGTTCTGACTACTCCTCACCGTCCATATGGGAGCAACAAAACTTCTCTTGATGAAATTAGAAGAATCAGAGAAGCAGGTGGATGGATTAGCAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGATATGCGATTCAAAACGAAGAAGAATGAGATGCTGCAAAAAGGAGTTCAGGAAGGAAAATGGTCAGCAAAGTTCATCTCTCGTGTACAGCTCAACAATGACTTGGTTGTAGCATACCCTGATATTTATCAGGTAGCTCTTGGCTCCGATGCAGAATTTTTAGTATTAGCAACCGATGGCTTGTGGGATTACATCAGCAGCTCAGAAGCAGTTTCTTTAGTTAGGGATCAACTAAGAAAACATGGAAACATTCAGCTAGCATGTGAATCGCTTGCAGAAGCCGCTTTGGACCGACGTTCACAGGATAATATTAGCATTATAATTGCCGATTTAGGGCGGACAGACTGGCTGAATGTGCCACTGGAGCAACAAAACACTATAGTTGAGCTGGTTCAAGCTCTTGCTACCATTGGAATTGTGTCTTTTGGAATCTGGTTTTCATCACAGCTTTCTTTATAG 1161 0.4599 MALSTPHMQRFHLCKLHTRSTSKTTHKNTFTTTTRGRCCSAIAIDAPSSLTEVPGVRWGSIALQGLREEMEDDIIVRPDGLQGFSFAAVFDGHGGFSSVEFLRDELYKECVEALQGGLLLVQKDFKAAKGALQEAFLKADTRLLKRLEMNGEEDESGATATAVFIGDDELLISHIGDSSAVLCRSGKAEVLTTPHRPYGSNKTSLDEIRRIREAGGWISNGRICGDIAVSRAFGDMRFKTKKNEMLQKGVQEGKWSAKFISRVQLNNDLVVAYPDIYQVALGSDAEFLVLATDGLWDYISSSEAVSLVRDQLRKHGNIQLACESLAEAALDRRSQDNISIIIADLGRTDWLNVPLEQQNTIVELVQALATIGIVSFGIWFSSQLSL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01443 386 CDD PP2Cc 64 345 IPR001932 -
Phco7g01443 386 SMART PP2C_4 47 343 IPR001932 -
Phco7g01443 386 SUPERFAMILY PP2C-like 49 346 IPR036457 -
Phco7g01443 386 PANTHER PROTEIN PHOSPHATASE 2C 34 343 IPR015655 GO:0004722|GO:0006470
Phco7g01443 386 Pfam Protein phosphatase 2C 59 338 IPR001932 -
Phco7g01443 386 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Phco7g01443 386 ProSiteProfiles PPM-type phosphatase domain profile. 57 345 IPR001932 -
Phco7g01443 386 Gene3D - 56 350 IPR036457 -
Phco7g01443 386 FunFam Protein phosphatase 2C 57 56 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01443 Phco-Chr7 13429363 13433248 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01443 7 13429363 13433248 Phco7g01443 7 13429363 13433248 ECH
Phco7g01443 7 13429363 13433248 Phco2g00212 2 1639879 1641558 PCT