Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00518 ATGAAGGACATAACAACCTTCACTTCGACAACAACAATGGACCCCAGAGTCTGGAGCAAATTACCTCCTGATGTTGTGGAACACATACTTCTGTTACTCCCTCTCAAGACTCTCTTGAACCTCAGACCCACTTGCAAGGCCTTCTCCTCTCTTCTCTTCTCTCCTTCCTTTGTCTCCAAACACTCTTCATCATCATCATCATCTTCTTCTTCTTCTTCTTCCTCACCCTTCTCTTCCTTTCTCTTACTCTCATACCCTCAGTGCCCTCTCTACTTCCGTCTCTACGATTCCAACCTTTCCTCTTGGCGCACCATCTCTCCCTCTCTCCCTTTCTCATCTTCCTTCTCTCTTGTATCCTCCTCCGGTGGCCTCTTTTGTCTCTTCAACCCCTCTTCCTCTTCCTTTCTCGTATGCAACCTCTTTGCAAAGACCTCAAGAAGGATAGAATCCCCAACTCACTCTCTTCACTTCACCCACCTAGCTCTTGTCACCACCCCTCTTAGCTACAACTTAGTGCTCCTTTCTTCAAAGTCAACCTCCAACACTGCCTTTGTCTACAACTCTAACGACCTCTCGTGGAAGCGCTTCGAGGGGTTCGATGCTATCCTCAGCGACAGTTGTCACCAGCAGGGCACTTTCTTCCACGGGGGACTGTACTTCACCACCCCGGAGCCGTTCTCCGTGGTGCGTTTGGATTTGGAGAGTGGGAAGTGGGAGAGGCACGTGGCTGAGTTGCCCCAACAACTGACTTTCGTGAGGCTGGTCAGTGATGACGATGGAGAGGGGAAATTGTATTTGGTTGGTGGGGTTGGAACCGATGGAATCTCCAGAAGTATCAAGTTGTGGGAATTAACGGGTGAAGGGGTTTGGGTGGAAATGGCGGCGTTGCCTGAGATTATGTGTAGAAAATTTGTGTCGGTTTGTTACCATAACTATGAACATGTTTATTGCTTCTGGCATGAGGGTATGATCTGCGTTTGCTGTTACATGTGGCCAGAGATATTGTACTACAGTGTTTCCAGGAGAAGTTGGGATTGGCTTCCAAGGTGTCCCTATTTGCCTCTAAAGTCTACCTGTGGTTTCAAGTGGTTTTCTTTTCTTCCAAAGCTCTATGCTTCCGTCTGA 1125 0.4827 MKDITTFTSTTTMDPRVWSKLPPDVVEHILLLLPLKTLLNLRPTCKAFSSLLFSPSFVSKHSSSSSSSSSSSSSSPFSSFLLLSYPQCPLYFRLYDSNLSSWRTISPSLPFSSSFSLVSSSGGLFCLFNPSSSSFLVCNLFAKTSRRIESPTHSLHFTHLALVTTPLSYNLVLLSSKSTSNTAFVYNSNDLSWKRFEGFDAILSDSCHQQGTFFHGGLYFTTPEPFSVVRLDLESGKWERHVAELPQQLTFVRLVSDDDGEGKLYLVGGVGTDGISRSIKLWELTGEGVWVEMAALPEIMCRKFVSVCYHNYEHVYCFWHEGMICVCCYMWPEILYYSVSRRSWDWLPRCPYLPLKSTCGFKWFSFLPKLYASV 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00518 374 Gene3D - 91 371 IPR015915 GO:0005515
Phco7g00518 374 SUPERFAMILY Kelch motif 90 353 IPR015915 GO:0005515
Phco7g00518 374 Gene3D - 14 60 - -
Phco7g00518 374 SUPERFAMILY F-box domain 15 90 IPR036047 GO:0005515
Phco7g00518 374 Pfam F-box domain 18 57 IPR001810 GO:0005515
Phco7g00518 374 ProSiteProfiles F-box domain profile. 15 61 IPR001810 GO:0005515
Phco7g00518 374 PANTHER BNACNNG10540D PROTEIN 10 371 - -
Phco7g00518 374 FunFam F-box domain containing protein 7 60 - -
Phco7g00518 374 FunFam F-box family protein 84 361 - -
Phco7g00518 374 SMART fbox_2 21 61 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00518 Phco-Chr7 3798950 3800074 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00325 2 2676573 2677727 Phco7g00518 7 3798950 3800074 PCT