Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00510 ATGGCTTCCAGTTTTGATCGATGGGAAAAAGATCCTTTCTTTAGTGCTGCCGAAGAAGTTCAGGAATCTTCAGACAGGATGGAATCTACCTATAGAACATGGATTCACGCAGTGAAGGATGCATCCACCTTATGGAACTGTGATGAACTTCACCGAGATCTACAAACCGCCCTTGGCACTGCTAAATGGCAGTTAGAGGAGTTTGAACGGGCTACTCGGTCAAGTTATAGTAAAGTTTCAACTGAGGATGCGAAAACTAGGCACCGAGATTTTGTTGATGCCATCCGTGACAAGATCAGCAAAGTTGAACATCTGTTATTAGAGCCTGTTCATTCGGGTAGGAAGGCATCAATGCCTTGGCCCCGTCTGGATGAAGGAGAACGTGATGAACTAGCATCATTTCTCTCGGGAACATCGGCTTCGGTTTGCAAAATCCCTGTTAAATGTACCAGCAATGTGCAATTAATTGACAAAGATTCGTTCCCTAATTGTTCACCCAATTTACAAGTTTCATCTGCGCGGGGTTCGTCTGATGCAGCACAGGAAAAGTCACTTGGGCATCGCAGAGCAGCTAGTGCTGATGCTGATATTAGTTCTTGGAAAATCACTGTTTCTGATGGTGTCCAACAATCGAGTTCCTCCAATGGTTCTTCCGGTGTAATTCCTATGCACAAGGTAGCCAGTCTCTCCGGATTTTTTGGTTCCGTGAGAACTATCTCTAAGTTGAAGTGGTCTAAGAATGGTTATCGAAAGCTGAAACCAGCGAATCATTGTGAAGAGACGGATAATGAACTATTACAATCAGCTGGATTGAATGGGGGCATCAATGCATACTATGAAGAACGTAAGAGTTGCCTTGATAATTATGATGAATCTTATGATAAGCAACTCCACGGGTGGTACGGGGCTTTGCAAAGGCAGCTTCAGAGATCTCAATACCAAATGCAATACAATCGGCATGTTCAAATAACTATCTGGGCTGTTATTCTCCTTTGCTTGATTGGTAGGCTCTGGATCTTTGTTTGTGTTTTAAAAAAATGCAGCCAGCACTCCTTGATCATGAAACTATTTTCGTCCCTTTTTACTCCTGCTTCCTTTGATTCTGAAAGGCAGAAGGCTGCTTCTCGGTGCTCTTCGTTCCGTTCTATGTGCATGATTTCACACTTTTTATTGCTTTTTGCACGATGTAGAAAGGAAGATTTTGTTACATTATGTATCATTCTGTGGAATGCGGCGGACAGAATCGGGTTTGGACAAGCGATGCCTTGA 1269 0.4326 MASSFDRWEKDPFFSAAEEVQESSDRMESTYRTWIHAVKDASTLWNCDELHRDLQTALGTAKWQLEEFERATRSSYSKVSTEDAKTRHRDFVDAIRDKISKVEHLLLEPVHSGRKASMPWPRLDEGERDELASFLSGTSASVCKIPVKCTSNVQLIDKDSFPNCSPNLQVSSARGSSDAAQEKSLGHRRAASADADISSWKITVSDGVQQSSSSNGSSGVIPMHKVASLSGFFGSVRTISKLKWSKNGYRKLKPANHCEETDNELLQSAGLNGGINAYYEERKSCLDNYDESYDKQLHGWYGALQRQLQRSQYQMQYNRHVQITIWAVILLCLIGRLWIFVCVLKKCSQHSLIMKLFSSLFTPASFDSERQKAASRCSSFRSMCMISHFLLLFARCRKEDFVTLCIILWNAADRIGFGQAMP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00510 422 CDD SNARE_NTD_STX6-like 11 103 - -
Phco7g00510 422 PANTHER OS05G0443700 PROTEIN 1 337 - -
Phco7g00510 422 SUPERFAMILY t-snare proteins 10 104 IPR010989 GO:0016020|GO:0016192
Phco7g00510 422 FunFam Syntaxin 10 8 109 - -
Phco7g00510 422 Gene3D - 9 107 - -
Phco7g00510 422 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Phco7g00510 422 MobiDBLite consensus disorder prediction 169 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00510 Phco-Chr7 3732997 3735288 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00510 7 3732997 3735288 Phco7g00510 7 3732997 3735288 ECH
Phco2g00311 2 2551015 2553109 Phco7g00510 7 3732997 3735288 PCT