Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00500 ATGGAGACCCGCGCCGCAGCAAAGAGAAAGGCAACTGCTGCTGTTGCCACCGTGGTCGTGGTCGAAAAGCCACACCCCAAAAGGCAGCGTGTTGTGTTGGGTGAACTTTCAAATTATCCAAATGCCATTGTCTCCGAAACTCAAAATCAATGCAAAGAGAAACTACAATGTCGGAAGAATCCAAATTTGAAGAAACCTTCTCCAGCGAAGTTCACTCCCCCTTCCTCCCAGATTGACCAACCTTATGTTTCTGACATCTATGAGTATCTGCATTCGATGGAGATGCAGAGGAAGAGGAGACCAATGGTTGACTATATTGAGAAAGTTCAGAGAGAAGTTACTGTAATCATGAGGACAATATTGGTGGATTGGCTAGTAGAGGTAGCTGAAGAGTACAAGCTTCACTCGGACACCCTTCATCTCTCTGTTTCATACATAGATAGGTTTTTATCGGTCAATCCTGTTAGTAAGTCAAGACTTCAATTACTGGGTGTTTCGTCCATGCTCATTGCTGCTAAATACGAGGAAGTTGACCCACCCCGTGTTAATGCTTTCTGCGGTATCACTGATAACACATACAATAAGAAAGAGGTTGTAAAGATGGAAGCTGACATACTCAAGTCTCTGAAGTTTGAGATGGGAAATCCTACTGTAAATACCTTTCTAAGGAGGTTTGCAGATGTTGCTTCTGATAACCAAAAGGCTCCAAATTTACTGTTTGAATTTCTGAGCTGCTATCTTGCTGAATTAAGTTTGTTGGACTATGATTGCTTGAGAATTTTGCCTTCTATTGTGGCAGCGTCTGCTGTATTTCTTGCCAGATTTATTATCTCTCCTGAAGTTCATCCTTGGACTTCTTCCTTGTGTGGATGCTCTGGTTACGAAGCAGTTGAGCTGAAAGAATGTGTCATCATCTTGCATGACTTGTATTTGTCAAGAAAGGCAGCGTCCTTCAAAGCTATTAGGGAGAAATACAAGCAGCACAAGGTACTTATCTTTTTCATTTATTTTGTTATAATCTACTTCAGTTCTGATTTTGACAAATTGAGTGACTTGAAATCTTCTACTGGAACAGTTCAAGTTCGCAGCAAACTTGCCTTCTCCTCCACATGTGCCAAGTCATTACTTTGA 1131 0.4156 METRAAAKRKATAAVATVVVVEKPHPKRQRVVLGELSNYPNAIVSETQNQCKEKLQCRKNPNLKKPSPAKFTPPSSQIDQPYVSDIYEYLHSMEMQRKRRPMVDYIEKVQREVTVIMRTILVDWLVEVAEEYKLHSDTLHLSVSYIDRFLSVNPVSKSRLQLLGVSSMLIAAKYEEVDPPRVNAFCGITDNTYNKKEVVKMEADILKSLKFEMGNPTVNTFLRRFADVASDNQKAPNLLFEFLSCYLAELSLLDYDCLRILPSIVAASAVFLARFIISPEVHPWTSSLCGCSGYEAVELKECVIILHDLYLSRKAASFKAIREKYKQHKVLIFFIYFVIIYFSSDFDKLSDLKSSTGTVQVRSKLAFSSTCAKSLL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00500 376 SUPERFAMILY Cyclin-like 216 330 IPR036915 -
Phco7g00500 376 Pfam Cyclin, N-terminal domain 85 213 IPR006671 -
Phco7g00500 376 PANTHER CYCLINS 62 327 IPR039361 -
Phco7g00500 376 FunFam G2/mitotic-specific cyclin 101 212 - -
Phco7g00500 376 ProSitePatterns Cyclins signature. 118 149 IPR006671 -
Phco7g00500 376 FunFam Cyclin superfamily protein, putative 213 285 - -
Phco7g00500 376 Gene3D - 99 214 - -
Phco7g00500 376 SMART Cyclin_C_2 216 334 IPR004367 -
Phco7g00500 376 CDD CYCLIN_AtCycA-like_rpt2 216 329 - -
Phco7g00500 376 SMART cyclin_7 220 308 IPR013763 -
Phco7g00500 376 SMART cyclin_7 123 207 IPR013763 -
Phco7g00500 376 Pfam Cyclin, C-terminal domain 216 330 IPR004367 -
Phco7g00500 376 SUPERFAMILY Cyclin-like 78 213 IPR036915 -
Phco7g00500 376 Gene3D - 85 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00500 Phco-Chr7 3668018 3669716 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00308 2 2510562 2515329 Phco7g00500 7 3668018 3669716 PCT