Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00479 ATGAAGCAGTGGATACACGTGGCGCTGGCCGCATCCGCCGTGGGATGCGTCTCCACCCTTATCTTGGTCTTTCTCTGGCGTTGGTGTCACAAAAAAAACGGCACGAATTTCGTTGAACCGGCTAGTTTGACCAGGGTGGAGAGTGTGCAGGGAGGGATTTCTGTTTCCAGGCTTCATCCGCAACCTTTTCAGTTGGATCAGGGGAGCAAGAACAGCAACAAGGGTAATTACAATTACTATATTTTTCGCGGTGGTGGGGTGTCGGGCAAAAAAAACTTCTTCAATTGGGGTGATCACCCATCCATGGCCGCTGATGCTGTTGAAAATGGATGGTCACGATTTTCCTTCACGGGGTACAAGAGTTACACGCCGTCTCCTTCGAAAAGATCGTCACTTTTGGGAGCGTGTGCTGCACCGGGAGGAAGTGATTTTGGGAGAGAATCAGAGGCTGAGATAAGCTGGGAAGTGTCACGTGGATCTGCTGAGTTTATGCAGAAGGTCAGGTTGAATCCTGGTATAAAAAAATCTCAGCAAAGCAACAACAGTAATGGTTCTCTGGGCGTTGCTTCTATCATTAGAGGAGCTTTGCCTTTGCCTGGGCCTCCTCTGGGGAATTGTGCGTTCCCACAAGAAGCATATTTTGAGATTACCATTTTGTACTCACGTGGTGACGAGTGTGAATCTGTTGGGAAGAGTGGGGAAGGTGAGAAGACCAAGCTTTTGGTTCAAGGAAACTCCAATAGTAAAGGGAATTCCGAAGCTTTGGTTCATGTTACCAGTGGGAATGGAAGTAATAAAATCAACAATGTTGAAGGAGAGGGTGGGAAGGGTGAATCTTTGATGTTCTCGTTGGGATTAACAGCAGGGGGTTCTGTTCCTTTGAGAGTTCCCGGTAGCTATCCTGGAAGCATTGGCTTCAACTCCAACGGTTCTCTCTATCTTGATGGAATGAAACTTGTAAGCGAATCGGAGAAGGCAGAGTGGGTGGGAACTGATAAAGTGATTGGTTGTGGATTTGATCCAAGGCAGAAGAAGGTTTTCTTCACAGTAGACTCTGATCTAATGCATGTAATTCACTGCCAGACAGAGGAGTTTGGCACACCACTTTTTCCAATCATGGCTGCAAATATAGACATATTGGTGTTAGTTAATTTTGGACAAAGTGCATTCAAATATGCACCTGCCAATGCCCAGAGAACACCAAATCCATGCTTCATAGCCCCACTGGTAAATTCCCCTGCTGCTACCTTGGGCTATGATGACAGCAAGGAGCTATTCTCAATGGGAAGGATCGATTCGCAGTGGCTCAATCGCTCCACAACCAAAGGAAGTCACAATAATAATAATAATAATAATAACCATAATAATAATGGAACATTGGATTTTGACGAGGAGTCTGAGGCTGATCTATTTGAAATCGTCTTAGATGGTTCTGCAAAATGTCCATATCCAGCATCATAG 1461 0.4559 MKQWIHVALAASAVGCVSTLILVFLWRWCHKKNGTNFVEPASLTRVESVQGGISVSRLHPQPFQLDQGSKNSNKGNYNYYIFRGGGVSGKKNFFNWGDHPSMAADAVENGWSRFSFTGYKSYTPSPSKRSSLLGACAAPGGSDFGRESEAEISWEVSRGSAEFMQKVRLNPGIKKSQQSNNSNGSLGVASIIRGALPLPGPPLGNCAFPQEAYFEITILYSRGDECESVGKSGEGEKTKLLVQGNSNSKGNSEALVHVTSGNGSNKINNVEGEGGKGESLMFSLGLTAGGSVPLRVPGSYPGSIGFNSNGSLYLDGMKLVSESEKAEWVGTDKVIGCGFDPRQKKVFFTVDSDLMHVIHCQTEEFGTPLFPIMAANIDILVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPAATLGYDDSKELFSMGRIDSQWLNRSTTKGSHNNNNNNNNHNNNGTLDFDEESEADLFEIVLDGSAKCPYPAS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00479 486 MobiDBLite consensus disorder prediction 438 461 - -
Phco7g00479 486 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Phco7g00479 486 MobiDBLite consensus disorder prediction 438 459 - -
Phco7g00479 486 SUPERFAMILY Concanavalin A-like lectins/glucanases 295 392 IPR013320 -
Phco7g00479 486 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 87 475 IPR043364 GO:0098609
Phco7g00479 486 Pfam SPRY domain 213 380 IPR003877 GO:0005515
Phco7g00479 486 Gene3D - 174 400 IPR043136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00479 Phco-Chr7 3470718 3472719 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00479 7 3470718 3472719 Phco7g00479 7 3470718 3472719 ECH
Phco2g00281 2 2270743 2272885 Phco7g00479 7 3470718 3472719 PCT