Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00443 ATGTCTGGTCGGAGTGAACACCAAACGGTTCCCCTTTCGGTGCTGCTCAAGCGTGAGTTGGCCAACGAGAAAATTGAGAAGCCGGATGTTGTCATCGTGCACGGTCAAGCTAGTGAGAACAAGAAAGGAGAGGATTTCATGCTGTTGAAGACGGAATGCCAGAGGGTGGTGGGAGATGGGGTTTCTACTTATTCCGTTTTTGGGCTATTTGATGGACATAATGGATCTGCTGCCGCTATTTATACCAAGGATAATCTCCTGAACAACGTTTTAAGTGCAATTCCTTCTGATCTTAACAGAGATGAGTGGGTTTCAGCGTTGCCTAGGGCTTTGGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTCAAGAAAAAGCACACACATCAGGAACAACTGTAACCTTCATGATTATAGATGGGTGTGTTGTGACAGTTGCATCAGTTGGTGATTCCCGTTGCGTACTTGAACCTTATGAAGGTGGGATTTATTACTTGTCAGCAGACCATAGACTAGATAGCAACGAAGAGGAGAGGGTCCGCATCACTTCTAGTGGAGGTGAGGTTGGTCGTTTAAATACAGGTGGAGGCACAGAGGTTGGTCCTTTGAGATGTTGGCCTGGTGGTTTGTGTCTCTCCCGATCCATTGGTGATATGGATGTTGGTGAATTTATTGTCCCTGTACCACACGTAAAGCAAGTGAAGCTTTCTACTGCTGGAGGCAGGATCATTATCAGCAGTGATGGTGTCTGGGATGCTCTAACAGCAGAATTGGCCCTTGATTGCTGTCGTGGCATGTCAGCTGAGGCTGCAGCACCACATATTGTGAAAGAAGCCGTGCAGGCAAAGGGACTTAGAGATGACACAACTTGCATTGTTATTGATGTATATCCGCAGGAGAAGCAACCTACTTCTGTTACAACCCAAAAGAAACCGGTAAAAGGAAGGCTTAAGTCCATTTTTCGCAAAAAGTCCTCTGAATCATCATCTTACGTTGACAAACAATACCAGGAGCCAGATATGGTACAGGAACTATACGAGGAAGGGTCTGCTATGCTTTCAGAGAGGTTGGAAACAAAATATCCGCTCTGCAACATGTTCAAGTTGTTTATCTGCGCAGTGTGTCAGGTAGAGATTAAACCTGGGGAGGGTATTTCTATACACGTAGGTCTGTCTAACCCAGGAAGACTGCGTCCCTGGGATGGACCTTTCCTTTGCTCAAGTTGCCAGGAGAAGAGGGAAGCCATGGAAGGGAAGCGAGCATCAGATAGACTCAGCAGCGGAAGTGACTAA 1290 0.4612 MSGRSEHQTVPLSVLLKRELANEKIEKPDVVIVHGQASENKKGEDFMLLKTECQRVVGDGVSTYSVFGLFDGHNGSAAAIYTKDNLLNNVLSAIPSDLNRDEWVSALPRALVAGFVKTDKDFQEKAHTSGTTVTFMIIDGCVVTVASVGDSRCVLEPYEGGIYYLSADHRLDSNEEERVRITSSGGEVGRLNTGGGTEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQVKLSTAGGRIIISSDGVWDALTAELALDCCRGMSAEAAAPHIVKEAVQAKGLRDDTTCIVIDVYPQEKQPTSVTTQKKPVKGRLKSIFRKKSSESSSYVDKQYQEPDMVQELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISIHVGLSNPGRLRPWDGPFLCSSCQEKREAMEGKRASDRLSSGSD 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00443 429 CDD PP2Cc 40 295 IPR001932 -
Phco7g00443 429 ProSiteProfiles PPM-type phosphatase domain profile. 29 295 IPR001932 -
Phco7g00443 429 SMART PP2C_4 23 293 IPR001932 -
Phco7g00443 429 FunFam probable protein phosphatase 2C 12 34 301 - -
Phco7g00443 429 Pfam Protein phosphatase 2C 41 279 IPR001932 -
Phco7g00443 429 SUPERFAMILY PP2C-like 40 295 IPR036457 -
Phco7g00443 429 Gene3D - 25 305 IPR036457 -
Phco7g00443 429 PANTHER PROTEIN PHOSPHATASE 34 294 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00443 Phco-Chr7 3178794 3182569 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00443 7 3178794 3182569 Phco7g00443 7 3178794 3182569 ECH
Phco2g00248 2 1908267 1911835 Phco7g00443 7 3178794 3182569 PCT