Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00435 ATGGAGAGAACAAAGTCATCCCTTCTACAGATTCAGCCTCCAACCTATGGAAACTTAGTCACAATTCTCAGCATCGATGGAGGTGGCATTAGGGCAATTATCCCCGCAACTATTCTTGCTTTCCTTGAAGCACAACTTCAGGAATTGGACGGTGAAGATGCAAGGCTTGCAGACTATTTTGATGTGATTGCAGGAACAAGCACAGGTGGACTTGTAACAGCCATGTTAAGTGCTCCAAATGATCGTCAACGTCCATTATTTGCTGCTAAGGATATCAGGCCCTTTTACTTGGACCACTGTCCAAAGATTTTCCCACAACGCAGTAGCATGTGGGGATGGATAGAAAAGTTGTTGAGATCATTAGGAGGACCAAAATACGATGCAAAATACCTTCAAGGAGTGGTGAGGGAGAAGCTAGGGGAGACACGTTTGCATGAAACGCTGACCAATATTGTGATTCCCACCTTTGACATCAAGTCATTGCAGCCAATCATTTTCTCCTCTTATCAAATCAAGAGATCTCCTTATTTGGATGCTCCACTCTCTGACATATGCATCGGCACTTCTGCTGCACCAACTTATCTTCCACCCCACCACTTCAAGAACACAGATTCAGAAGGGACCACGCACGAATTCAACCTCATTGATGGTGGCGTTTGTGCTAATAATCCGAGTTTAGTAGCCGTAAATCAGGTAACGAAGCAGATCATTGATGACAATCCTGACTTCTTTTCCATCAAGCCAATGGAATATGGTCGTTTCCTGGTAATCTCTCTGGGCACTGGGACCCCCAAGAATGAACACAAATTCAACGCTAAAATGGCAGCAAAATGGGGTCTATTCGATTGGTTAACCAACAGTGGCTCTACTCCCTTGATCGATGTTTTGACTCACTCCAGTGCAGATATGGTTGATTTCCATCTTGCTACTGTCACCCAAGCTCTTCATTCAGAAAATAACTACCTTCGTATACAGGATGATACATTGACCGGTACAGATGCTTCACTTGATATTGCCACTAAAGAAAATTTGGAAAAACTTTGCCAAATTGGTGATAGGTTGTTGAAGAAACCAGTATCCCAGATCAATTTGGAGACTGGTCTGTTTGAACCCATGGGAGATGGGGAGACAAATGAAGATGCTCTCAGAAGGTTTGCGAAAATGCTTTCACAAGAGAGGAGTTTCCGAGAATTGAAATCCCCTCACACTAACAATTCCCTAAAATAG 1227 0.4344 MERTKSSLLQIQPPTYGNLVTILSIDGGGIRAIIPATILAFLEAQLQELDGEDARLADYFDVIAGTSTGGLVTAMLSAPNDRQRPLFAAKDIRPFYLDHCPKIFPQRSSMWGWIEKLLRSLGGPKYDAKYLQGVVREKLGETRLHETLTNIVIPTFDIKSLQPIIFSSYQIKRSPYLDAPLSDICIGTSAAPTYLPPHHFKNTDSEGTTHEFNLIDGGVCANNPSLVAVNQVTKQIIDDNPDFFSIKPMEYGRFLVISLGTGTPKNEHKFNAKMAAKWGLFDWLTNSGSTPLIDVLTHSSADMVDFHLATVTQALHSENNYLRIQDDTLTGTDASLDIATKENLEKLCQIGDRLLKKPVSQINLETGLFEPMGDGETNEDALRRFAKMLSQERSFRELKSPHTNNSLK 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00435 408 CDD Pat17_isozyme_like 17 367 - -
Phco7g00435 408 Gene3D Cytosolic phospholipase A2 catalytic domain 10 401 - -
Phco7g00435 408 PANTHER XYLOSE ISOMERASE 6 397 - -
Phco7g00435 408 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 229 IPR002641 GO:0006629
Phco7g00435 408 FunFam Patatin 12 401 - -
Phco7g00435 408 SUPERFAMILY FabD/lysophospholipase-like 18 366 IPR016035 -
Phco7g00435 408 Pfam Patatin-like phospholipase 23 228 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00435 Phco-Chr7 3105496 3108067 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00435 7 3105496 3108067 Phco7g00435 7 3105496 3108067 ECH
Phco2g00238 2 1854083 1857072 Phco7g00435 7 3105496 3108067 PCT