Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00429 ATGCGGGAAAGCTCGCGACGGAGAACGATTAGTGCTGTTAAGGGTGGAAAAACATCGAGCAAAGATAGAAAACTGGCTTTACAGCAAGATGTTGACAGGTTGAAGAAAAAGCTTAGACGTGAGGAGAACATCCACAGAGCATTGGAGAGAGCTTTCAACAGGCCTTTGGGAGCTTTGCCTCGTCTTCCTCCTTATCTCCCTCCCTATACTCTAGGACTTCTGGCTGAGGTGGCAGTACTGGAAGAAGAAATTGTTAGGCTAGAAGAACAGGTTGTGCATTTCAGGCGGGACTTGTACCAGGAAGCTGTGTACATGTCATCCTCTAAGATGAAACTTGAGCAATCCGCCGGTGTGAACAACGCAAGCCCAAATAGTAGTCCCGATCCGGTTAAAGTGGAGTCCCTTTCCCAGACAATGGATAATGCTGCAAGATCTGAAACCAGGCCAAAGGATACACATGGAAAAGAGAACCAATCATGTACTAATTCTTCCAAGGGTAGCAAGCAGTCCGTATGCAAAGGCCTAACTACAAAATCGCCGATTAAGAAACTTCCCACTGACAATAAATCACTGCAGAAACGTTGGCATCCTCCAAAAAAGCAGGAAGAACTAAGGGTGAAAGACCAGCCAATTGCAGAAGTTAGAAACCATAGTCTACACGAAAAACCAAAAGGGGGGGAAAGTCCAAATGTAATCTCTGAAAATATTCTGAAGTGTTTATCAAGCATTCTCCTGAGAATGAGTACTGCGAAGAATTTGGATTCTGCAGGTAATGTACTACACTCATGGACTCCAAAATATAATAAAAACTGCGTTGAAGGAAGTGAGTTTTGGGATCCTTACGGTATCTGTTTGGAATTCGGAAAGAGGGATATTGGTCCGTACAAGCAATTACGTGCAGTTGAAGCCAAATCATTCGATCCAAAACGAACTGCAAAGTCTTTGTTTTTACTGCACCGGTTGAAACTTCTTCTGAGAAAACTAGTCTGTGTCAACTTTGAGAATCTCAACCACCAGGAGAAGCTTGCATTCTGGATCAACATCTATAACTCATGTATGATGAATGCATACATAGAAAATGGCATACCAGAGAGTCCTGAAATGGTTGTTGCGCTGATGCAGAAGGCCACAATAAATGTGGGTGGACACTTGCTAAGTGCAACAACCATAGAACATTGCATTTTAAGACTTCCTTATCACTGCAAATTTGCAACAATATCAAAGGGAGGGAAAAATCATGAAACTTACGGAATAGAATTGTCAGAACCCCTGGTGACATTTGCTCTATCCTGTGGAACTTGGTCCTCTCCTGCTGTGAGAATTTACACAGCATCTCAGGTTGAGAACGAACTTGAAATGGCCAAAAGGGAATACTTGCAGGCTGCAGTTGGAATTTCGACAGCAAAGTTCCTTATCCCGAAGTTGCTGGATTGGTATTTACTGGACTTTGCAAAAGACTTGGAATCATTGCTGGATTGGATGTGCCTCCAATTACCAAGTGATGTGGGGAAAGAAGCCATTAAGTTCCTTGAGGAAAGAAAAACCCAGCCCCTCTCACAATTTGTACAGATTATGCCACATGAGTTCAATTTTAGATACCTGTTGTGGACATAG 1614 0.4294 MRESSRRRTISAVKGGKTSSKDRKLALQQDVDRLKKKLRREENIHRALERAFNRPLGALPRLPPYLPPYTLGLLAEVAVLEEEIVRLEEQVVHFRRDLYQEAVYMSSSKMKLEQSAGVNNASPNSSPDPVKVESLSQTMDNAARSETRPKDTHGKENQSCTNSSKGSKQSVCKGLTTKSPIKKLPTDNKSLQKRWHPPKKQEELRVKDQPIAEVRNHSLHEKPKGGESPNVISENILKCLSSILLRMSTAKNLDSAGNVLHSWTPKYNKNCVEGSEFWDPYGICLEFGKRDIGPYKQLRAVEAKSFDPKRTAKSLFLLHRLKLLLRKLVCVNFENLNHQEKLAFWINIYNSCMMNAYIENGIPESPEMVVALMQKATINVGGHLLSATTIEHCILRLPYHCKFATISKGGKNHETYGIELSEPLVTFALSCGTWSSPAVRIYTASQVENELEMAKREYLQAAVGISTAKFLIPKLLDWYLLDFAKDLESLLDWMCLQLPSDVGKEAIKFLEERKTQPLSQFVQIMPHEFNFRYLLWT 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00429 537 PANTHER EXPRESSED PROTEIN 13 535 - -
Phco7g00429 537 MobiDBLite consensus disorder prediction 156 186 - -
Phco7g00429 537 MobiDBLite consensus disorder prediction 114 133 - -
Phco7g00429 537 MobiDBLite consensus disorder prediction 187 209 - -
Phco7g00429 537 Coils Coil 24 51 - -
Phco7g00429 537 Pfam Protein of unknown function, DUF547 334 459 IPR006869 -
Phco7g00429 537 Coils Coil 70 97 - -
Phco7g00429 537 Pfam Leucine-zipper of ternary complex factor MIP1 20 101 IPR025757 -
Phco7g00429 537 MobiDBLite consensus disorder prediction 140 209 - -
Phco7g00429 537 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00429 Phco-Chr7 3046761 3049970 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00429 7 3046761 3049970 Phco7g00429 7 3046761 3049970 ECH
Phco2g00227 2 1762053 1764976 Phco7g00429 7 3046761 3049970 PCT