Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00415 ATGGAAGCTGGAGCAACGATGGTGTTGAAGGACTCTTTTGACTATTTAATGGAATTGTACGTCATGAGCTCGTACTCAAAACCACTTTTAAATTGGAACAACTCTACACCAATCTCTACAATCCCCATGTGCACCTCTCCGCACGCAGTAATGCCAACCTTTGCACCCATGCCAGAGCCAGACCTCTCCTTAAACATCAGCCCTCCGATCACTTCAGATCCTCACGCTAAACAGGTGGAAACAAGCTGCACCGGATTAACATTAACCACCAAAACGCTTTACACCGACCTGTGCTCAACCTCGGATTCTGGTAGCAGTGGAAGCGATTTAAGCAACGAAAATGGTTTTTGCAACACTGCCTACAACCTTGGTCATCGTGAACCGACATTGAGCTTAGGCTTCGGAAGGGAAAATTTGAATCCTTATCGTATCCAAGGAGCAGTGTCCAGAAACTTCAATCACCACAACTACCAACCTCAGACCAATACCTTTGATTTCAAACGAAATGCTAGAGGCATTCCAGGTGTGAAAAGAAGCTCCAGAGCTCCTAGAATGCGATGGACTACGACCCTCCACGCTCATTTTGTTCATGTGGTTCAGCTTCTTGGCGGGCATGAAAGGGCAACTCCGAAGTCTGTGTTAGAGTTAATGAACGTTAAGGATCTAACTCTAGCTCACGTGAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCTCTGACAAAAGCAGCGCAGGTTATGGGCAGACAGGTATAGGGTTGAGCAAAAAACCAGAGATTGTCGATCTGCATGAAGCCTTAGCTTGTGAGAGACCAAATTTGCCACAGCCGCTGCTAAAACTCCACAGGGCGCCATGGCAGTCATCGATGGAGACAAATTCCATAAATTACACACATAACCCCATTATCAATTCAATGTATTCTCATCTCAAAGGAAACCAAACCATGGTGGGTGGACAGCATTATGGAGGCCTGTCGAATTGCATGGCGGAGAAATTGGAATCTTGCTCTTTGTCACGTTCCGATATGACGCTAGACCTAGAATTTACCCTTGGAAGGCCCACTACTTGCAAAGAGATCACGCAGAAACAAGAGCATTAA 1101 0.4587 MEAGATMVLKDSFDYLMELYVMSSYSKPLLNWNNSTPISTIPMCTSPHAVMPTFAPMPEPDLSLNISPPITSDPHAKQVETSCTGLTLTTKTLYTDLCSTSDSGSSGSDLSNENGFCNTAYNLGHREPTLSLGFGRENLNPYRIQGAVSRNFNHHNYQPQTNTFDFKRNARGIPGVKRSSRAPRMRWTTTLHAHFVHVVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSSDKSSAGYGQTGIGLSKKPEIVDLHEALACERPNLPQPLLKLHRAPWQSSMETNSINYTHNPIINSMYSHLKGNQTMVGGQHYGGLSNCMAEKLESCSLSRSDMTLDLEFTLGRPTTCKEITQKQEH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00415 366 Gene3D - 182 239 - -
Phco7g00415 366 SUPERFAMILY Homeodomain-like 180 237 IPR009057 -
Phco7g00415 366 Pfam Myb-like DNA-binding domain 184 235 IPR001005 -
Phco7g00415 366 NCBIfam myb-like DNA-binding domain, SHAQKYF class 183 236 IPR006447 GO:0003677
Phco7g00415 366 FunFam Myb family transcription factor 181 239 - -
Phco7g00415 366 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 57 356 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00415 Phco-Chr7 2936112 2940934 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco7g00415 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00415 7 2936112 2940934 Phco7g00415 7 2936112 2940934 ECH
Phco2g00214 2 1665378 1668607 Phco7g00415 7 2936112 2940934 PCT