Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00405 ATGGCCAAATCGAGCGCTGACGATGCCGAGCTCCGGCGAGCGTGCCAGCTCGCAGTTGAGGGCACCAGACACAAGGTCGTTCTCTCCATTCGGACCGTCAAGACTCACGGCACGTGGGGAAAATCTGCTAAGCTTGGTCGTCAAATGGCTAAGCCCAGGGTTCTCGCTCTATGCACAAAAGCGAAAGGTCAGCGGACAAAAGCTTTTCTTCGTGTTTTAAAGTATTCAACTGGAGGGGTGCTTGAGCCTGCTAAGTTATACAAGCTGAAGCACCTCTCAAAAATGGAAGTCGTAACAAGTGACCCCAGTGGGTTTACATTTACACTGGGGTTTGATAACCTTAGAAGCCAGACTGTGGCTCCTCCTCCACAGTGGACAATGCGCAATACCGATGACAGAAATCGCCTCCTGCTTTGTATCTTAAATATCTGCAAAGATGTCCTGGGTCGCTTACCTAAGGTTGTTGGTATTGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCTGCAGTTTCCGCTCAAAGTAACCAACAAGGTGGTGCTTCTATTGAATCTTCTGTGACTGAAACAGAATTGAAAGTCTATGTTGAAAAGGAACTTGTCTCCCAGGCAGAGGAAGAGGACATGGAGGCTCTTCTGGGAAATTATATCATGGGTGTTGGTGAAGCAGAGGCATTTTCTGAAAGGTTAAAAAGAGAGCTACAGGCACTGGAAGCAGCAAACGTGCATGCCATTTTAGAAAGTGAACCTTTGATAGATGAGGTGTTGCACGGGCTTGAATTAGCAACAAATTGTCTGGAAGACATGGATGAATGGTTAGGCATGTTCAACATAAAACTTCGACACATGAGGGAAGATATTGAATCAATTGAAACGCGCAATAACAAGTTGGAAATGCAAAGTGTAAATAACAAAACTCTTATAGAAGAGCTTGATAAGCTTCTTGAGCAATTGAGTATCCCTTCCGAGTATTCAGCATGTTTGACAGGAGATTCATTTGATGAAGCACAAATGCAGCAAAACATAGAAGCATGTGAGTGGTTGACAACTGCCATGCGTGGTCTAGAAGTGCCTAACATAGATCCTATTTATGCAAAAATGAGAGGAGTTAAAGAGAAACGAGGAGAACTTCAAATAATAAAGTCTACTTTTGTTGGGAAAGCTTCTGAGTACATGAGAAGTTACTTTGCTACTTTTGTGGACTTTATGTTGAATGATAGAAATTACTTTTCTCAGCGAGGGCAGTTGAAAAGGCCAGATCATGCTGACTTGAGGTTCAAGTGCAGGACATATGCACGCCTTCTTAAGCATTTAAAGATTCTTGATAAGAATTGTTTGGGTCCACTGAGAAAAGCTTATTGCAGTTCCCTAAACTTGCTTCTTCGCAAGGAGGCTCGCGAATTTGCTAATGAACTTCGTGTTGGTGTGAAAACTTCTAAAAACCCCTCTCTTTGGCTTGAAGTCTTCACTGGTTCTGGTCAAAATGTAAATCCTGCTGACACTGCAACAGTTTCTGAAGCATACACAAAGCTGCTCACAATTTTTATCCCACTTCTGGTGGATGAGAGCTCCTTTTTTGCGCACTTCATGTGCTTTGAAGTTCCTTCAACTGTTGATGGTAATAAAATTAAACACAATGATGAGGATAATGATGATGGTATTACATCTGCTACATGTCTCACCTTCAAGAAGTTTCCTTGGAAAAGTGTTGTGGTGGATATTGCAGCTTTAAATGAATCACTTCAGGATTTGCTTGATGGAATTCAAGAAGAGTTCTCTGCTGTTGTGGACTGGGCATACAAGATTGATCCTTTGTGCTGCATATCAATGCATGGAACTACAGAGCGCTATCTCTCTAGTCAGAAAGCTGATGCAGCAGGATATGTACGCATTTTGCTTGATGACCTAGAGTGTCGCATATCTATGCAGTTCAGCCGATTTGTGGATGATGCTTCCCATCAAATTGAAAGAAATGAGCGCAATGCTCGCCAAACAGGTGTCCTACCATACATTCCTAGATTTGCATCCCTTGCAACAAGGATGGAGCAGTTTGTTGCAGGACAGTCGAGGGATTTGGTTGACCAAGCATACACAAAATTTGTCAGCATAATGTTCGTAACTTTAGAAAAAAATTCACAAGCAGATCCAAAGTATGCAGATATTTTTCTTATAGAAAACTATGCCGCATTTCAGAATAGTTTGTATGACCTTGCACATGTTGTGCCCACTTTAGCCAAGTTTTATCATCAGGCTAGTGAAGAATACGAGCAAGCTTGTACACGCCATATTAGTGTGATTATCTACTATCAATTTGAACGCCTTTTCCAGTTTGCTCGAAAGATCGAGGACTTGATATTGAATAATGTTGCACCTGAAGAGATTCCTTTCCAAGTTGGGCTGTCAAAAGTGGATCTACGAAAGACGTTAAAGTCCAGTTTATCTGGGGTGGACAAGTCCATTGCTGCAATGTATAAGAAGTTGCAGAAAAACTTGACTTCGGAGGAACTGTTACCTTCCTTATGGGATAAATGCAAGAAGGATTTTCTTGATAAGTACGAATCTTTTGTCCAACTTGTTGCCAAGATCTACCCTGCTGAGTCAGTCCCTTCTGTGGCGGAGTTGCGAGACCTTTTAGTTTCCATGTAA 2652 0.4223 MAKSSADDAELRRACQLAVEGTRHKVVLSIRTVKTHGTWGKSAKLGRQMAKPRVLALCTKAKGQRTKAFLRVLKYSTGGVLEPAKLYKLKHLSKMEVVTSDPSGFTFTLGFDNLRSQTVAPPPQWTMRNTDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWAKENTPAVSAQSNQQGGASIESSVTETELKVYVEKELVSQAEEEDMEALLGNYIMGVGEAEAFSERLKRELQALEAANVHAILESEPLIDEVLHGLELATNCLEDMDEWLGMFNIKLRHMREDIESIETRNNKLEMQSVNNKTLIEELDKLLEQLSIPSEYSACLTGDSFDEAQMQQNIEACEWLTTAMRGLEVPNIDPIYAKMRGVKEKRGELQIIKSTFVGKASEYMRSYFATFVDFMLNDRNYFSQRGQLKRPDHADLRFKCRTYARLLKHLKILDKNCLGPLRKAYCSSLNLLLRKEAREFANELRVGVKTSKNPSLWLEVFTGSGQNVNPADTATVSEAYTKLLTIFIPLLVDESSFFAHFMCFEVPSTVDGNKIKHNDEDNDDGITSATCLTFKKFPWKSVVVDIAALNESLQDLLDGIQEEFSAVVDWAYKIDPLCCISMHGTTERYLSSQKADAAGYVRILLDDLECRISMQFSRFVDDASHQIERNERNARQTGVLPYIPRFASLATRMEQFVAGQSRDLVDQAYTKFVSIMFVTLEKNSQADPKYADIFLIENYAAFQNSLYDLAHVVPTLAKFYHQASEEYEQACTRHISVIIYYQFERLFQFARKIEDLILNNVAPEEIPFQVGLSKVDLRKTLKSSLSGVDKSIAAMYKKLQKNLTSEELLPSLWDKCKKDFLDKYESFVQLVAKIYPAESVPSVAELRDLLVSM 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00405 883 Coils Coil 282 319 - -
Phco7g00405 883 Coils Coil 222 249 - -
Phco7g00405 883 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 49 145 IPR028258 -
Phco7g00405 883 PANTHER SEC3/SYNTAXIN-RELATED 59 871 - -
Phco7g00405 883 Pfam Exocyst complex component Sec3 506 866 IPR019160 GO:0000145|GO:0006887
Phco7g00405 883 Pfam Exocyst complex component Sec3 225 484 IPR019160 GO:0000145|GO:0006887
Phco7g00405 883 SMART Sec3_PIP2_bind_2 48 147 IPR028258 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00405 Phco-Chr7 2861557 2880573 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00405 7 2861557 2880573 Phco7g00405 7 2861557 2880573 ECH
Phco2g00209 2 1601194 1616321 Phco7g00405 7 2861557 2880573 PCT