Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00400 ATGGCGCGGTGCACCTCATGCGCGCTGTCCAGATTTCATTGCAAGCTTAGATTTGCGGTGGTTGTTTTCGAGATTATATTGATATTGGCGTGGGTGGAGGCCCACGATGCAAATCTCCACGAACATCAAGTTCAGGGAGGCTTGGGGAGGAATACTGAGAACATTGCCTCTCACTCTTGCATACACGATCAGATTCTTGAACAGAGGAAGCGGCCTGGACGCAAGGTGTATTTAGTTACCCCACAGGTTTATGAGCCCAGTCTTTTGAAACACCTTCAGCACAAAGGTAGGGCATTACTTGATGTGTCAACTTCATCAAGTTCTCAAGAGGATGCAAAGAAGCCTATCAGGATATATCTAAATTATGAAGCTGTTGGCCACTCCCCTGACAGGGATTGTCGAGCACTTGGTGATATTGTTAAACTCGGGGAGCCTCCCATGACTTATGCTCCTGGCTTTCCTTCCTGTGATCCCCATGGCAATCCTCCAATATTTGGTGATTGTTGGTATAACTGCACTTCTGAAGATATCTCAGGAGAGGACAAAAAACATCGCCTTCGTAAGGCATTAGGTCAGACAGCTGACTGGTTTAGGAGAGCATTGGCGGTTGAACCTGTCAAGGGGAACTTGCGTTTAAGTGGTTATTCTGCATGTGGACAAGATGGAGGTGTGCAGCTTCCTCGTGGATATATTGAGGAGGGTGTCTCTGATGCGGACTTGGTTCTTTTGGTGACTACAAGACCTACAACTGGAAATACACTTGCCTGGGCAGTGGCATGTGAGCGAGATCAATGGGGTCGTGCTATAGCTGGACATGTTAATGTTGCGCCTCGGCATTTGACTGCTGAGGCAGAGACTTTACTTTCTGCTACTCTTATACATGAGGTTATGCATGTTCTTGGTTTTGATCCACATGCCTTTGCTCATTTTAGAGATGAAAGGAAAAGACGGCGAAATCAGGTTACCGAACAAGTTATGGATGAAAAACTTGGACGAATGGTAACACGTGTGGTGCTTCCTCGCGTTGTCATGCATTCTCGGTATCATTATGCGGCGTTCTCTGGAAATTTTTCTGGTTTAGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGATCTCACTGGGAAAAAAGGCTTCTGATGAATGAAATTATGACTGGTTCTGTGGATACAAGATCTGTTGTTTCAAAAATGACATTAGCTTTACTAGAAGATAGCGGATGGTACAAAGCCAACTATAGTATGGCAGACCGTCTCGATTGGGGTCTCAACCAAGGTACTGAGTTTGTTACATCCCCTTGCAGTCTTTGGAAGGGAGCCTATCGTTGCAACACAACACAGTTTTCTGGTTGTACATATAACAGGGAGGCAGAGGGATACTGCCCCATCCTAACTTATAATGGAGATCTCCCTCAGTGGGCTCGGTATTTTCCGCAAGCTAATAAGGGTGGACAATCCTCATTGGCTGATTATTGCACTTATTTTGTTGCTTACTCTGATGGATCATGTACAGACACTAACAGTGCACGAGCACCTGATAGAATGCTAGGTGAAGTCAGAGGAAGTAACTCTAGGTGTATGGCTTCATCACTAGTACGGACAGGCTTTGTACGGGGTTCTATGACCCAGGGAAATGGTTGTTATCAGCACAGGTGTATGAATAATTCTTTAGAGGTTGCAGTGGATGGTATCTGGAAAGTGTGTCCTCAAGCTGGTGGACCCATTCAGTTCCCTGGCTTTAATGGTGAATTAATCTGCCCTGCCTACCATGAGTTGTGTGACACTGACCCAGTAGCTGTGTCTGGTCAATGCCCTAATTCATGTAATTTCAATGGAGATTGTGTTGATGGAAAATGCCAATGCTTTCTTGGATTTCGTGGGAATGATTGCAGTAGACGTACCTGCCCCAGCAAATGCAATGGCAATGGAATGTGCCTTTCCGATGGGATTTGTGAATGTAAACCTGGCCATACTGGCATTGATTGCTCCACTGCTGTGTGTGACGAGCAATGCAGCCTTCATGGCGGGGTTTGTGATAATGGAGTTTGTGAATTCCGCTGTTCTGACTATGCGGGTTATACATGCCAGAACAGCTCCATGCTTCTCTCTAGTCTTTCTGCGTGCAAAAATGTGTTGGGAAATGATGTTTCTGGGCAGCATTGTGCGCCCAGTGAGCCTAGCATACTTCAACAGCTGGAAGAAGTAGTTGTCATACCCAACTACCATCGATTATTCCCTGGAGGTGCTAGGAAATTATTTAATATATTTGGCAGCACCTACTGTGATGAAACTGCTAAACGTCTTGCCTGTTGGATCTCAATCCAGAAGTGTGAGAAGGATGGAGATAACAGGCTTCGGGTATGCCATTCTGCTTGCGAATCTTATAATCTGGCATGTGGAGCTTCACTTGACTGCTCTGATCAGACCCTTTTCAGCAGTGACGGGGTAGGGGAGGGTCAATGCACTGGCTCTGGTGAGATGAAAATGTCATGGTTTAATCGTCTACGAAACACTTTTTCTTTGAGAAATAGTTCCTTGAAAGGAATATCAGTAAGATATAGGCAACTTTAA 2571 0.4559 MARCTSCALSRFHCKLRFAVVVFEIILILAWVEAHDANLHEHQVQGGLGRNTENIASHSCIHDQILEQRKRPGRKVYLVTPQVYEPSLLKHLQHKGRALLDVSTSSSSQEDAKKPIRIYLNYEAVGHSPDRDCRALGDIVKLGEPPMTYAPGFPSCDPHGNPPIFGDCWYNCTSEDISGEDKKHRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYIEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRNQVTEQVMDEKLGRMVTRVVLPRVVMHSRYHYAAFSGNFSGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGLNQGTEFVTSPCSLWKGAYRCNTTQFSGCTYNREAEGYCPILTYNGDLPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCMNNSLEVAVDGIWKVCPQAGGPIQFPGFNGELICPAYHELCDTDPVAVSGQCPNSCNFNGDCVDGKCQCFLGFRGNDCSRRTCPSKCNGNGMCLSDGICECKPGHTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSACKNVLGNDVSGQHCAPSEPSILQQLEEVVVIPNYHRLFPGGARKLFNIFGSTYCDETAKRLACWISIQKCEKDGDNRLRVCHSACESYNLACGASLDCSDQTLFSSDGVGEGQCTGSGEMKMSWFNRLRNTFSLRNSSLKGISVRYRQL 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00400 856 Gene3D Laminin 603 631 - -
Phco7g00400 856 FunFam leishmanolysin-like isoform X2 498 593 - -
Phco7g00400 856 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 53 813 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Phco7g00400 856 FunFam leishmanolysin-like peptidase isoform X2 310 434 - -
Phco7g00400 856 Gene3D Leishmanolysin , domain 2 309 434 - -
Phco7g00400 856 ProSitePatterns EGF-like domain signature 1. 651 662 IPR000742 -
Phco7g00400 856 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 110 599 - -
Phco7g00400 856 ProSiteProfiles EGF-like domain profile. 631 663 IPR000742 -
Phco7g00400 856 FunFam Peptidase M8, leishmanolysin 109 299 - -
Phco7g00400 856 Gene3D Leishmanolysin domain 3 436 496 - -
Phco7g00400 856 FunFam SD03917p 592 634 - -
Phco7g00400 856 Pfam Leishmanolysin 170 594 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Phco7g00400 856 Gene3D Laminin 632 700 - -
Phco7g00400 856 Gene3D - 108 299 - -
Phco7g00400 856 PRINTS Leishmanolysin (M8) metalloprotease family signature 397 426 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Phco7g00400 856 PRINTS Leishmanolysin (M8) metalloprotease family signature 244 273 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Phco7g00400 856 FunFam leishmanolysin-like peptidase isoform X2 437 496 - -
Phco7g00400 856 Gene3D Leishmanolysin domain 4 498 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00400 Phco-Chr7 2823751 2831816 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00400 7 2823751 2831816 Phco7g00400 7 2823751 2831816 ECH
Phco2g00196 2 1501590 1510111 Phco7g00400 7 2823751 2831816 PCT