Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00391 ATGACTTCCGACGGAGCAACGTCGGCGGCTGCGGCTGCCAATAGGAGGAAGCCATCCTGGAGGGAAAGAGAGAACAACCGGCGGAGAGAGAGGCGGAGAAGAGCCATAGCTGCCAAGATATACACTGGACTTAGGGCTCAGGGAAACTACAATTTGCCCAAACATTGCGACAACAACGAGGTTTTGAAGGCTCTATGCATCGAAGCTGGCTGGACTGTTGAAGAAGACGGCACCACCTATCGCAAGGGATGCAGGGTACCATTTCCAAGTGATGGCGCTGGCACCTCCACCAGAAACACCCCTTTTTCATCGCAAAATCCAAGTCCTCTTTCTTCATCGTTTCCGAGTCCAATTCCTTCCTACCAAGTTAGCCCCTCCTCCTCCTCTTTCCCGAGCCCTACTCGTTTGGATGACAACAACGCGTCAAATTTGATTCCCTATATTCGACATTCGTTCTCTGCTTCTCTTCCTCCTCTGAGGATATCAAATAGCGCTCCTGTGACTCCGCCTCTGTCCTCGCCAACTTCAAGAAACCCCAAACCAATCCCCACATGGGACTCCATTGTCAAAGCCTCCATGGCATCATCCTTCAACCACCACCACCAAAACCACCCTTTCTTCGCGGCTTCTGCCCCGGCTAGCCCCACACACCGCCACCTTCATGCCCCGCCCACTATTCCTGAATGTGATGAGTCTGATACCTCCACTGTTGAGTCTGGCCAGTGGTTGAACTTCCAAGCATTTGCACCTTCTGTTTCTGCAGTGCCCATCTCTCCCACCTTGAATTTTATCAAGCCTGTTGTGAGTCAACAGCAGAAGCACAACCTCAACCACCCTGATAACCGTATCCAAGAGATGAGAAACTCAGAAGTGCAATTTGGGGTGCAGGTGAAGCCCTGGGTTGGGGAGAGGATTCATGAAGGGGGATTGGATGATTTGGAGCTCACTCTAGGAAGTGGGAAGACGCTTGTTTAG 975 0.5179 MTSDGATSAAAAANRRKPSWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCIEAGWTVEEDGTTYRKGCRVPFPSDGAGTSTRNTPFSSQNPSPLSSSFPSPIPSYQVSPSSSSFPSPTRLDDNNASNLIPYIRHSFSASLPPLRISNSAPVTPPLSSPTSRNPKPIPTWDSIVKASMASSFNHHHQNHPFFAASAPASPTHRHLHAPPTIPECDESDTSTVESGQWLNFQAFAPSVSAVPISPTLNFIKPVVSQQQKHNLNHPDNRIQEMRNSEVQFGVQVKPWVGERIHEGGLDDLELTLGSGKTLV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00391 324 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 10 322 IPR033264 GO:0003700|GO:0006351|GO:0009742
Phco7g00391 324 MobiDBLite consensus disorder prediction 92 137 - -
Phco7g00391 324 MobiDBLite consensus disorder prediction 89 137 - -
Phco7g00391 324 MobiDBLite consensus disorder prediction 1 31 - -
Phco7g00391 324 MobiDBLite consensus disorder prediction 16 31 - -
Phco7g00391 324 Pfam BES1/BZR1 plant transcription factor, N-terminal 14 143 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00391 Phco-Chr7 2748397 2750037 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Phco7g00391 BES1_N 2.1e-60 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00391 7 2748397 2750037 Phco7g00391 7 2748397 2750037 ECH
Phco2g00188 2 1457782 1459711 Phco7g00391 7 2748397 2750037 PCT