Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00372 ATGGCCTCAAGCCAGGGTTGGACACCGAAGCAGAACAAAAGATTTGAGAATGCCCTTGCCATCTTCGACAAGGACACCCCAGACAGGTGGCACAACCTGGCCAGGGCCGTAGGAGGAAAAACTGTGGAAGATGTGAAAAGGCATTACGAGAAGCTCGTGGAAGATGTGAAGCAGATTGAGGAAGGCCATGTGCCCCTTCCCAATTACCGAAGTGTTGCAACTATGGCAAGCAGCATCAGAGGTTACAGTTACATGGATGCAGAAAACAGGATGAAGGGTATGAGTCTGCAGATAATGGTTTTCCTTTTATGTAATGATGATGATGCAAGCACGCATTGCGAGATGGCGTGTGACAAAGAAATAAGGAAACCCACACCAAGGTAA 384 0.4792 MASSQGWTPKQNKRFENALAIFDKDTPDRWHNLARAVGGKTVEDVKRHYEKLVEDVKQIEEGHVPLPNYRSVATMASSIRGYSYMDAENRMKGMSLQIMVFLLCNDDDASTHCEMACDKEIRKPTPR 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00372 127 FunFam Transcription factor SRM1 1 66 - -
Phco7g00372 127 Gene3D - 1 66 - -
Phco7g00372 127 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Phco7g00372 127 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 77 IPR044636 GO:0003700
Phco7g00372 127 SMART sant 3 55 IPR001005 -
Phco7g00372 127 CDD SANT 7 53 IPR001005 -
Phco7g00372 127 Coils Coil 42 62 - -
Phco7g00372 127 SUPERFAMILY Homeodomain-like 5 60 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00372 Phco-Chr7 2600802 2603474 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco7g00372 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00372 7 2600802 2603474 Phco7g00372 7 2600802 2603474 ECH
Phco2g00164 2 1288649 1289347 Phco7g00372 7 2600802 2603474 PCT