Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00357 ATGGCGGTGATGCGTCGGTTGCTTTTGCTTTTCTTTGTTCTGTATGTGGCAGTGGAGCAGAGTAAGGTGCTGAAGGTGGAAGCAGATGATGGTGGTGCGTTTGTGAAAACAAGAGGAGTGCAGCTTGTACTGAATGGAAGCCCCTACTATGCCAATGGCTTCAATGCCTATTGGCTTATGTACATTGCCTCTGATCCTTCTCAGAGAAACAAAGTCTCTTCAGCCTTTCAACAGGCTTCAAATCATGGACTCAACATAGCCAGAACTTGGGCTTTCAGTGATGGTGGCTATAATCCCTTACAATACTCTCCTGGATCCTACAATGAACAAGTCTTCCAGGGATTGGATTTTACGATAGCCGAAGCAAGAAAATACGGGATGAAGCTGGTTCTGAGTTTGGTGAATGACTATGAGAACATGGGTGGCAAGAAACAATATGTAGAATGGGCAAGGAGTCAGGGACAGTCCATAAATTCTGAAGATGACTTTTTCACAAATCCTGTGGCTAAGGGATTCTACAAAAACCACATCAAGGCTGTACTTACAAGACGTAATAGCATCACTGGAATTGCATACAAAGACGACCCAACTATAATGGCTTGGGAACTTATGAATGAGATTAGGTGCCCTTCTGATCAATCAGGAAAAACTGTTCAGGCTTGGATTTCTGAGATGGCATCTTACCTGAAATCCATAGATGGAAACCACTTGCTGGAAGCAGGTTTGGAGGGATTCTACGGCCAGTCAAAGCCTCAGTCAAATCCAAATTTCAATGTTGGAACCGATTTCATTGAAAACAACCAAATCCCTGGCATTGATTTCGCAACAGTGCACTCCTACCCTGACCAATGGCTATCGAGTTCAGGTTATGAAGAGCAAATGTCATTCTTAGGGCGGTGGGTGGATGAGCACATCCAAGATGCACAGAACACTCTTCACAAGCCAGTTCTCTTTGCGGAGTTCGGTATTTCCACAAAAAGCTTCGGTGGCAACTCATCACCAAGGGATCGGTTATTCAACACGGTATATTCAGCAATATACTCATCCGCAAGTAGCGGTGGTGCTGCTGTTGGTGGCTTGTTTTGGCAGCTTCTAGCTCAAGGAATGGATTCCTTTCGAGATGGTTACGAGGTGGTCTTAGATGAAAGCCCCTCGACGGCTAGTTTGATAGCTCAACAGTCTCAAAAACTAAACCACATTCGAAAGATGTACGCCAGACTCAGAAACATTGAGAAGTGGAATAGAGCCAAGGAAATTAGAGGCTCACAATGGCATGTTGGTGCTAACGTTGGAAACTAA 1299 0.4465 MAVMRRLLLLFFVLYVAVEQSKVLKVEADDGGAFVKTRGVQLVLNGSPYYANGFNAYWLMYIASDPSQRNKVSSAFQQASNHGLNIARTWAFSDGGYNPLQYSPGSYNEQVFQGLDFTIAEARKYGMKLVLSLVNDYENMGGKKQYVEWARSQGQSINSEDDFFTNPVAKGFYKNHIKAVLTRRNSITGIAYKDDPTIMAWELMNEIRCPSDQSGKTVQAWISEMASYLKSIDGNHLLEAGLEGFYGQSKPQSNPNFNVGTDFIENNQIPGIDFATVHSYPDQWLSSSGYEEQMSFLGRWVDEHIQDAQNTLHKPVLFAEFGISTKSFGGNSSPRDRLFNTVYSAIYSSASSGGAAVGGLFWQLLAQGMDSFRDGYEVVLDESPSTASLIAQQSQKLNHIRKMYARLRNIEKWNRAKEIRGSQWHVGANVGN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00357 432 SUPERFAMILY (Trans)glycosidases 34 388 IPR017853 -
Phco7g00357 432 Gene3D Glycosidases 32 401 - -
Phco7g00357 432 PANTHER - 5 420 IPR045053 GO:0004553
Phco7g00357 432 FunFam Mannan endo-1,4-beta-mannosidase 6 31 401 - -
Phco7g00357 432 Pfam Cellulase (glycosyl hydrolase family 5) 67 327 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00357 Phco-Chr7 2527602 2530656 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00357 7 2527602 2530656 Phco7g00357 7 2527602 2530656 ECH
Phco2g00144 2 1182454 1185620 Phco7g00357 7 2527602 2530656 PCT