Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00337 ATGGAAACCATTACCAATTCAGTTTCCAAGTTACTGACATTGTTTTTCACTCTCTTGTTTGTGGGGTCTCAGCTGATACACTGCAATGTCACCTATGACGGAAAGTCTCTTCTCATCAATGGCCAAAGGAGAATCCTCATTTCTGGCTCCATCCACTATCCCAGAAGCACCCCTGATATGTGGGAGGATCTAATTAGGAAAGCCAAACATGGAGGCCTTGATGTCATAGACACTTATGTCTTCTGGGATGTCCATGAACCATCTCCTGGCAATTATAATTTTGAAGGAAGGTATGATCTAGTACGGTTTATTAAGACGGTGCAGAAGGTGGGACTTTATGCCAACCTTCGAATTGGACCTTACGTGTGCGCTGAGTGGAACTTTGGAGGAATTCCTGTATGGTTGAAGTATGTTCCTGATATAAGCTTTAGAACGGATAATGAGCCTTTCAAGGCAGCAATGCAAGGTTTCACGCAGAAAATTGTCCAGATGATGAAGAGTGAGAAGTTGTTTCAGTCTCAGGGTGGTCCAATAATTCTCTCTCAGATTGAGAATGAGTACGGACCAGAGAGCAGGGCAATGGGAGCTGCTGGTCGTGCATACCTAAACTGGGCTGCAAGCATGGCTGTTGGATTGGGCACAGGAGTGCCCTGGGTGATGTGCAAGCAAAATGATGCCCCAGATCCTGTAATCAATTCATGTAATGGTTTTTACTGCGATGATTTCACTCCAAATAAACCTTACAAGCCTAGCATGTGGACTGAGTCTTGGAGTGGCTGGTTTACAGATTTTGGTGGCCCAATTCACCAGCGACCAGTTCAGGATCTATCATTTGCAGTTGCTCGTTTCATTCAACAGGGTGGCTCATATGTGAATTATTACATGTATCATGGTGGAACTAACTTTGGACGATCAGCTGGAGGCCCATTCATTACTACAAGCTATGACTATGACGCTCCAATTGACGAATATGGTTTGATCAGGCAACCAAAATATAGTCATTTGAAGGAGCTTCATAGAGCTATCAAGCGGTGTGAACATGCTTTGGTTTCTTCGGATCCCACTGTTGCGTCGTTAGGAAATCTACAGCAGGCTCATGTATACTCTTCAGGTACTGGAACATGTGCGGCTTTTCTAGCAAACTATAATGCAAAGTCTGCTGCCACGGTGACATTCAATAACAGGAACTATGATTTACCTCCTTGGTCCATAAGCATCCTTCCTGATTGCAAAACTGATGTATTTAATACTGCAAAAGTGAGAATTCAAACTTCACAGGTAAAAATGCTTCCTGTCAAATCTAAGTTGTTCTCATGGGAGAGCTATGATGAAGATCTATCTTCTCTGGCTGAGAGTTCAAGGATTACATCTCCTGGACTCTTAGAACAACTCAATGTTACCAGGGACAGCAGCGACTACCTATGGTACATAACCAGCATTGACATAAGTTCGTCAGAAACCTTTCTTCGAGATGGACAAAAACCCAGCATTAATGTGCAGTCTGCAGGACATGCTGTTCATGTGTTCGTTAATGGGCAATTTTCAGGGTCGGCTTTTGGGACAAGGGAGCAGAGAAGTTGCACATTTAATGGACCTGTAGATCTCCACGCTGGAACAAATAAAATTGCTCTTCTCAGCGTGACTGTTGGATTACCTAATGTTGGTCGGCATTATGAAACATGGGAGACAGGGATCACTGGTCCAGTTATGCTACATGGTCTTGACCAGGGACAGAAAGATTTAACATGGAATAAGTGGTCATATAAGGTTGGCCTAAGAGGAGAGGATATGAATTTGGTGTCTCCCAATGGAGTCTCGTCTGTTGATTGGGTCCAAGAATCACAAGGTACACAAAGTCGGTCGCAATTGAAATGGTACAAGGCATATTTTGATGCACCCGGTGGAAAGGAACCACTGGCTCTGGACCTAGAAAGCATGGGTAAGGGTCAAGTATGGATCAACAGGCAGAGCATAGGGAGATATTGGATGGCTTATGCAAAGGGTGATTGTAATTCTTGCACATATTCTGGGGCCTTTCGCCCTGTAAAGTGCCAACTTGGTTGTGGCCAACCCACTCAACGATGGTATCACGTTCCAAGGTCCTGGCTAAAGCCAACGAAGAACTTGATAGTAGTGTTTGAAGAATTAGGCGGAAATCCATGGAAAATATCTTTGGTGAAGAGAATGGTACATACTCCGGCAGTTCATGGGCAGTGA 2217 0.4416 METITNSVSKLLTLFFTLLFVGSQLIHCNVTYDGKSLLINGQRRILISGSIHYPRSTPDMWEDLIRKAKHGGLDVIDTYVFWDVHEPSPGNYNFEGRYDLVRFIKTVQKVGLYANLRIGPYVCAEWNFGGIPVWLKYVPDISFRTDNEPFKAAMQGFTQKIVQMMKSEKLFQSQGGPIILSQIENEYGPESRAMGAAGRAYLNWAASMAVGLGTGVPWVMCKQNDAPDPVINSCNGFYCDDFTPNKPYKPSMWTESWSGWFTDFGGPIHQRPVQDLSFAVARFIQQGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYSHLKELHRAIKRCEHALVSSDPTVASLGNLQQAHVYSSGTGTCAAFLANYNAKSAATVTFNNRNYDLPPWSISILPDCKTDVFNTAKVRIQTSQVKMLPVKSKLFSWESYDEDLSSLAESSRITSPGLLEQLNVTRDSSDYLWYITSIDISSSETFLRDGQKPSINVQSAGHAVHVFVNGQFSGSAFGTREQRSCTFNGPVDLHAGTNKIALLSVTVGLPNVGRHYETWETGITGPVMLHGLDQGQKDLTWNKWSYKVGLRGEDMNLVSPNGVSSVDWVQESQGTQSRSQLKWYKAYFDAPGGKEPLALDLESMGKGQVWINRQSIGRYWMAYAKGDCNSCTYSGAFRPVKCQLGCGQPTQRWYHVPRSWLKPTKNLIVVFEELGGNPWKISLVKRMVHTPAVHGQ 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00337 738 SUPERFAMILY Galactose-binding domain-like 583 732 IPR008979 -
Phco7g00337 738 FunFam Beta-galactosidase 448 585 - -
Phco7g00337 738 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Phco7g00337 738 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Phco7g00337 738 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Phco7g00337 738 PRINTS Glycosyl hydrolase family 35 signature 252 267 IPR001944 GO:0004553|GO:0005975
Phco7g00337 738 PRINTS Glycosyl hydrolase family 35 signature 309 325 IPR001944 GO:0004553|GO:0005975
Phco7g00337 738 PRINTS Glycosyl hydrolase family 35 signature 289 304 IPR001944 GO:0004553|GO:0005975
Phco7g00337 738 PRINTS Glycosyl hydrolase family 35 signature 648 664 IPR001944 GO:0004553|GO:0005975
Phco7g00337 738 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Phco7g00337 738 PRINTS Glycosyl hydrolase family 35 signature 621 635 IPR001944 GO:0004553|GO:0005975
Phco7g00337 738 FunFam Beta-galactosidase 294 422 - -
Phco7g00337 738 Pfam Glycosyl hydrolases family 35 36 341 IPR031330 -
Phco7g00337 738 SUPERFAMILY Galactose-binding domain-like 404 575 IPR008979 -
Phco7g00337 738 Pfam Beta-sandwich domain in beta galactosidase 349 420 IPR041392 -
Phco7g00337 738 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Phco7g00337 738 Gene3D - 597 734 - -
Phco7g00337 738 Gene3D - 440 588 - -
Phco7g00337 738 FunFam Beta-galactosidase 25 345 - -
Phco7g00337 738 FunFam Beta-galactosidase 593 734 - -
Phco7g00337 738 Gene3D Glycosidases 23 345 - -
Phco7g00337 738 PANTHER BETA-GALACTOSIDASE RELATED 22 731 IPR001944 GO:0004553|GO:0005975
Phco7g00337 738 SUPERFAMILY (Trans)glycosidases 29 345 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00337 Phco-Chr7 2389326 2394083 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00337 7 2389326 2394083 Phco7g00337 7 2389326 2394083 ECH
Phco2g00121 2 1051347 1056643 Phco7g00337 7 2389326 2394083 PCT