Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00335 ATGGCATTCCCGCAGCTTATCCCTTCTCCTTCTTCTTCTTCTTTACCTCACAAACCCTCCTTAAACCCTATAACACTCTCCCTAAACCCTAAATCCCCAACCTCTTTGCACCAACTCAATCTCGCCGTTCTCCGTCACCGCTGCCGGAAGCCTAATTCCACTCTCCGCTGCTCCGCATCTTCCTTCTCCGAGAAGCACCACACGAACTCCCCCAACTCCGATGACGTCGTCGAGCTTCCTCTCTTCCCTCTCCCTCTGGTCCTTTTCCCCGGTGCCATCCTCCCCTTGCAGATCTTCGAGTTCCGCTACCGCATCATGATGCACACACTCCTCCACACAGACCTCCGCTTCGGCGTCATCTATACCGACGCTGTCTCCGGTACTGCCGCCGTCGGTTGCGTCGGCGAAGTCATAAAGCACGAGCGCCTCGTGGATGACCGTTTCTTCCTCATCTGCAAGGGCCAGGAGCGCTTTCGTGTGAACAGTTTGGTCCGCACGAAACCCTATCTGGTCGCGCAGGTGACGTGGCTCGAGGACCGGCCATCTCCCTCCACAGACCTTGATCTGGACGGTCTCGCCACCGAGGTGGAGACCTACATGAGGGACGTTATCCGGTTATCCAACCGGTTGGGAGGGAAACCGGAGAAGGAGGTTGGGGATTTGAAAAGAAACCTGTTTCCAACGCCGTTCTCGTTCTTCGTTGGGAGCACCTTCGAGGGCGCGCCAAGGGAGCAACAAGCGCTGCTTGAATTGGAGGACACCGCGGCCAGATTGACGAGGGAGAAGGAAACATTGAAGAACACTCTCAATTACCTCACTGCTGCTTCTGCTGTTAAAGATGTTTTTCCCTCTTCTTCCAGTTCTTCTTGA 870 0.5529 MAFPQLIPSPSSSSLPHKPSLNPITLSLNPKSPTSLHQLNLAVLRHRCRKPNSTLRCSASSFSEKHHTNSPNSDDVVELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLHTDLRFGVIYTDAVSGTAAVGCVGEVIKHERLVDDRFFLICKGQERFRVNSLVRTKPYLVAQVTWLEDRPSPSTDLDLDGLATEVETYMRDVIRLSNRLGGKPEKEVGDLKRNLFPTPFSFFVGSTFEGAPREQQALLELEDTAARLTREKETLKNTLNYLTAASAVKDVFPSSSSSS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00335 289 SUPERFAMILY PUA domain-like 78 266 IPR015947 -
Phco7g00335 289 Pfam ATP-dependent protease La (LON) substrate-binding domain 78 266 IPR003111 -
Phco7g00335 289 Coils Coil 241 275 - -
Phco7g00335 289 ProSiteProfiles Lon N-terminal domain profile. 79 267 IPR003111 -
Phco7g00335 289 MobiDBLite consensus disorder prediction 1 29 - -
Phco7g00335 289 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 21 288 - -
Phco7g00335 289 SMART lon_5 78 267 IPR003111 -
Phco7g00335 289 Gene3D - 76 179 IPR046336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00335 Phco-Chr7 2382517 2383386 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00335 7 2382517 2383386 Phco7g00335 7 2382517 2383386 ECH
Phco2g00118 2 1046919 1047707 Phco7g00335 7 2382517 2383386 PCT