Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00333 ATGGACCTTGATCCTCGTCAATACGAAAACGTTGCTATAAATGACAATGACATCCACAGTATTGTACTGTCATATCTTATACACAATTGCTACAAAGAATCGGTAGAATCATTCATTACTAGCACTGGGACAAAGCAGCCGTCAGATTATTTAGAGGACATGGACAAAAGGAAAAGAATCTTTCACTTTGCACTTGAGGGAAATGCACTCAAGGCTATTGAGCTTACTGAGCAGCTAGCACAGGATATTTTAGAGAAGAATAAGGATTTGCAGTTTGATCTACTAAGCCTTCATTTTGTTGAGCTCGTCTGCTCAAGGAAATGCACAGAAGCTTTGGAGTTTGCTCAGACCAAGTTGGGCCCTTTTGGAAAGGAGCCCAAATACATGGAAAAACTTGAAGACTTTATGGCCCTTCTTGCTTATAAGGATCCAGAGAAATCCCCAATGTTTCATCTCCTTAGCTTAGAGTATCGGCAACAGGTTGCAGATAGTTTGAATCGAGCTATTCTTGCACACCTGAATCTTCCCAGATACACAGCAATGGAGAGGCTAATACAGCAGACTACAGTTGTTAGACAATGCTTAAGTCAAGAACCTGGCAAGGATGGGCCTCCGCCATTTTCCTTAAAGGATTTTCTCAAAAGTTGA 648 0.412 MDLDPRQYENVAINDNDIHSIVLSYLIHNCYKESVESFITSTGTKQPSDYLEDMDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKEPKYMEKLEDFMALLAYKDPEKSPMFHLLSLEYRQQVADSLNRAILAHLNLPRYTAMERLIQQTTVVRQCLSQEPGKDGPPPFSLKDFLKS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00333 215 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Phco7g00333 215 SMART Lish 14 46 IPR006594 GO:0005515
Phco7g00333 215 SMART toby_final6 106 201 IPR013144 -
Phco7g00333 215 MobiDBLite consensus disorder prediction 196 215 - -
Phco7g00333 215 PANTHER RAN BINDING PROTEIN 9-RELATED 7 198 - -
Phco7g00333 215 SMART ctlh 53 110 IPR006595 -
Phco7g00333 215 Pfam CTLH/CRA C-terminal to LisH motif domain 54 192 IPR024964 -
Phco7g00333 215 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00333 Phco-Chr7 2372152 2374870 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00333 7 2372152 2374870 Phco7g00333 7 2372152 2374870 ECH
Phco2g00117 2 1041451 1046726 Phco7g00333 7 2372152 2374870 PCT