Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00311 ATGGCTACACATCATCATCTTCATCTTCTTCTTCTACCTACCATGCTCTTCCACCTTCTCCTGTTCTCCCTTCCCCTTCCCTCCCAAGCCTCCGATTCCCAGTGGGAGCTCCTACACAAGACCATAGGCATCGTCGCCATGCACATGCAGCTCCTCAACAATGACCGTGTCATCATCTTCGACCGCACCGACTTCGGCTCTTCCAACCTCACTCTCCCCAACGGCACGTGTCGCCACGATCTCTCCGAAAAGGTTCTCAAAACTGACTGCACAGCTCACTCCATCGAATTCGACGTCGCATCCAACACCTTCCGCGCCCTCTTCGTCCAAACCGACGTCTGGTGCTCATCTGGCGGCGCCGTCGCCGACGGCACCCTCATCCAAACCGGCGGCTACAACGACGGCGAACGCAAAATAAGGTCCTTCTCTCCATGCAAAGGAAGTGAGGACTGTGAGTGGCAAGAAAGCGACAATGCCCTCGCAGTAAGAAGATGGTACTCCACCAATCACTATTTGCCAGATGGACGACAAATTATAATCGGAGGAAGAAGGCAATTCAACTACGAGTTTTACCCTAAGAGAAAAACAGCAGAAAATAACAAACCCTACGTGTTCCCGTTTCTGTTCCAAACTAATGATATGGGCGCGGAGAATAATCTTTATCCGTTTGTTGTTTTAAACGTAGACGGAAATCTATTTATTTTCGCCAACAACCGTGCGATTCTGTTTGATTACGAGAACGACGCCATTGTGAGAACGTACCCCGAGATACCCGGGGGAGACCCTAGGTGTTATCCTAGTACCGGGTCCGCGGTTTTGCTACCTCTGAAGAATTTGGAAGCGGCGAGGGTGGAAGCTGAGGTTTTGGTCTGCGGTGGGGCCCGCAGAGGGGCTTTTCAGCTTGTGCCCAAGGGGGTTTTCTCCGAAGCGTTGGATTCTTGCGCGCGGATTAAGATCACGGATCCAAATGCCACGTGGCTGGTGGAGACCATGCCGATGGGGCGGGTGATGAACGACATGGTGATGCTCCCCAACGGCGACGTTTTGATTATAAACGGAGCTCAATCTGGAACCGCGGGGTGGGAGAGGGCGGAGAATCCGGTTCTTCAACCGGTTATTTATAAAACCAACGGTTCGGGTGGGTCGCGTTTCGTGTTGCAACCCGCTTCGGATATTCCTAGGATGTATCATTCGACGGCCATTTTGGTTCGTGATGGAAGAGTGATCGTAGGTGGGAGCAACCCTCACGAGACATACATGTTCTCTAATGTGTCATATCCTACGGAGTTGAGACTGGAAGCTTTTTCTCCATTCTATCTGGGCTCTCAGTTTTCGCATCTACGTCCCATTATTCTAGAACCTTCTTCTCATACCAACTTGATGTATGGCAAGAAATTCAAGATGGGTATTAAGGTGAATGGAGCCCTTGTGCCTGATTTATTGTCCGTCACGATGTTAGCGCCGCCTTTTAACACGCACTCTTTTTCCATGAATCAGAGGTTGTTGGTGTTGTCCATGGGTGAAGTTAAGGTAAGTGCAAATTCAAGTTGTGAATTTGAGGTGACGGCGCCAGGTTCAGCTGTTCTTGCACCACCCACGTTTTATATGCTGTTTGTGGTTCATCAAGACATTCCTAGCGAGGGAATTTGGATCAAGATACAATGA 1665 0.5009 MATHHHLHLLLLPTMLFHLLLFSLPLPSQASDSQWELLHKTIGIVAMHMQLLNNDRVIIFDRTDFGSSNLTLPNGTCRHDLSEKVLKTDCTAHSIEFDVASNTFRALFVQTDVWCSSGGAVADGTLIQTGGYNDGERKIRSFSPCKGSEDCEWQESDNALAVRRWYSTNHYLPDGRQIIIGGRRQFNYEFYPKRKTAENNKPYVFPFLFQTNDMGAENNLYPFVVLNVDGNLFIFANNRAILFDYENDAIVRTYPEIPGGDPRCYPSTGSAVLLPLKNLEAARVEAEVLVCGGARRGAFQLVPKGVFSEALDSCARIKITDPNATWLVETMPMGRVMNDMVMLPNGDVLIINGAQSGTAGWERAENPVLQPVIYKTNGSGGSRFVLQPASDIPRMYHSTAILVRDGRVIVGGSNPHETYMFSNVSYPTELRLEAFSPFYLGSQFSHLRPIILEPSSHTNLMYGKKFKMGIKVNGALVPDLLSVTMLAPPFNTHSFSMNQRLLVLSMGEVKVSANSSCEFEVTAPGSAVLAPPTFYMLFVVHQDIPSEGIWIKIQ 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00311 554 Pfam Glyoxal oxidase N-terminus 47 293 IPR009880 -
Phco7g00311 554 Pfam Galactose oxidase-like, Early set domain 448 553 IPR015202 -
Phco7g00311 554 SUPERFAMILY E set domains 444 553 IPR014756 -
Phco7g00311 554 CDD E_set_GO_C 444 553 IPR015202 -
Phco7g00311 554 Gene3D Immunoglobulins 447 554 IPR013783 -
Phco7g00311 554 SUPERFAMILY Galactose oxidase, central domain 94 440 IPR011043 -
Phco7g00311 554 Gene3D - 29 444 IPR037293 -
Phco7g00311 554 PANTHER SECRETED PROTEIN-RELATED 27 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00311 Phco-Chr7 2181519 2183183 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00311 7 2181519 2183183 Phco7g00311 7 2181519 2183183 ECH
Phco7g00311 7 2181519 2183183 Phco2g00103 2 921227 923077 PCT