Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00300 ATGGCACCACTTTCCTTTGCCAAAATCGGATACAGCTCACAATTCAGATGCTTGCTTGCGTCTGACACAAACCATTCTAAGCATCCCAAAGGAGACACAAACTGCACACCTTCTATTCCGAATATCTTACTTAGGAACATAGCAACCACCTCGCCGCCACCGCCGTCACCGCCGCCACTCTCTCCGTCTTCGATTCTAATCGACTTCCTTATCCTTCACTTTTCACTTTTTAATCTCTTAGTAGCATTGTTGCTTCCACTGCTCCTCTCGCCTCACACTGTCTTCGCTCCCATTTTTTTATCTCGGAAATCGCCGTTACATAAATACCACTTCATTTCCATCACTCCCACTCCAGCACGCGCAGAAGCATTGCATCCCGAGTTTGCGATGGATCGACGCTGGCCTTGGAAGAAAAAATCATCGGAGAAGGCTGTGATTGAGAAAGCTGCTACTGCATTGGATTCCTCCGATGCTTCCAACAACCAGGATAACAAGAAACCAAACTACATTCAAATCTCTGCGGAATCCTACTCACATCTATCTAGCTTGGAGGATCAAGTGAAGACATATGAGGAAAAAGTTCAGGAACTGGAGGATGAGGTCAAGGAAATTAATGAAAAGCTGTCTGCGGCAAACTCCGAGATAAATACCAAGGAAAGCATGGTAAAGCAGCATGCTAAAGTTGCTGAAGAAGCTGTATCAGGCTGGGAAAAGGCTGAAGCTGAGGCTTTGGCATTGAAGAATCATCTAGAATCTGTCACTCTTTTAAAACTCACTGCCGAGGATCGTGCAACACATTTAGATGGCGCTCTTAAAGAGTGTATGCGACAAATACGAAACCTTAAGGAAGAACATGAGCTGAAAATACAGGACGTTGCTCTCTCAAAAACCAAGCAATTAGACCAGATTAAGGGGGAGCTCGAGGCGAAGATAGTGAATTTTGAACAGGAACTTCTTAGGTCTGCTGCTGAAAATGGGGCCCTGTCAAGGTCATTGCAGGAGCGCTCTAACATGCTAATCAAATTAAGTGAAGATAAGGCTCGTGCTGAGGCTGAAATTGAGCTTCTTAAGGGCAACATAGAAGCATGTGAAAGGGAAAATAATTCACTTAAATATGAACTACATGTTGCTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAAAACATGAGTATGAGGTCTGCAGAGGCTGCTAACAAGCAGCAGATGGAGGGTGTAAAAAAAATTGCTAAGTTAGAGGCTGAGTGCCAAAGATTACGTGGTCTTGTGAGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAGATGAAGCTAGAAGTTGAAAGCCTTGGCCGAGATTTTGGAGAGAGTCGATTAAGGAAGTCCCCTGTGAAGCCTGCTTCCCCTAATTTGTCTCCATTACCCGATTTCTCCCTGGAGAATGTGCAGAAATTCCAGAAGGATAATGAATTTCTTACTGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCTAAACGTAACAGTGAGTTGCAGGCCTCAAGGAGTATGTGCGCTAAAACACTGAGCAAACTTCAAAGTTTGGAAGTACAACCTCAGACAAGTAATCAGTTGAAAGGATCTCCAAAATCCATCGTCCAGATAACTCACGAAAGCATTTATAATCAAAATGCAAGCAGTGCACCAAGCTTGGTCTCCATGTCTGAAGATGGAAATGACGATGCAGTAAGTTGTGCTGAATCTTGGTCTACAGCAATAGTTCCTGGGCCATCCCAATTTCCTAAAGAAAAGTGCACTGAGGAATCAAGCAAATCTGAAGTCTCTAATAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAGTTGGCTCGTTTGTCAAATGATTCCACTGTAGACGCCACTGTTTCAGTTTCTTCAAACAATAAGACACCTGACATTGTGAATGGTGATGTATCCGAAGTCAGTATTGGCAAAGAAGGTCTGTCTGAAAAAATTGGCAATTCAAATCTACTGCCAAATCAAGTTTCTTCTGATGCTTTGATGTCAGCACCTGATCCTCAATCTGATGCTAGTGGCTTGATATTAAGAGAACTAAGATCAAGAATATTACTGGTTTTGGAGTCCTTAGCCAAGGATGCTGACATAGGGAAGATTGTGGAGGATATTAAACACGTGCTTGAAGATTCGCATGACATTACTATCCGCCACTCGGTGGATGCCCATCCTTCTGATGCTACGTGTGATAGGAAGGATGATCCTGAAGATGCTGGCTTAAACCTTGAAAAGGACATCATTTCATCCCAGCAACCCAGAGAATATGTGCATATAACTTCAGACTTGGAAGCTGCAATTTCTCAAATTCATGACTTTGTGCTGCTCCTTGGCAAGGAAGCAGTGACATTTCATGACATATCTTGTGATGGAAATGAAATGAGGCAAAAGATTGAGGAGTTCTCCGTCACATTTGATAAAATATTAAACAACAATGCAAGTTTACTACAGTTTGTTCTTGACCTGTCCTATGTTCTTGATAAAGCAAGTGAGTTCAGATTTAATGTTCTTTGCTACAAGGGCACAGAAGTTGAGAGTAACAGTTCTGATTGCATAGATAAGATTGCTTTGCCTGAAAATAAGCTAGTACAAGACAATTCATCCAGAGAAAGATATCAAACTGGCTGTTCCCATATTCTTAGTTCGTGTTCTAATCCTGAGATTCCCGATGATGAAAATTTGGTCTCAGGCTATAGAGTGGATGCTGCATCACAAAAACTGTCAATGCAAGAGTTTGAAGAATTGAAACTAGAGAAAGAAAAAGTAGTGACTGATCTGTCAAATTGTACTGAAACTCTTGAAATAACCAACTCTCAGTTGCTAGAGACTGAACAACTTCTAGCCGAAGTTAAATCACAATTAGCTTCTGCTAAAAAATCAAATAGCTTGGCTGAGACGCAGCTAAAGTGTATGGCAGAATCGTACAACTCTCTTGAAACACGTGCCCAGGTCTTGGAAACTGAGATGAACCGTCTGCAAATTAAGATAGAATCCCTGGAGAATGAACTTCAAGATGAAAAGAAGGCTCATGAAGCTGCTTTGGCTCGGAGCAAGGTTCTAGAAGAGCAGTTACAAAGGATTGAGTACTCGGCAGCTGATGATGACATCAAGACTCCGCATGATAGAGATTTGACAGCTGCTGCTGAAAAACTAGCCGAGTGTCAGGAAACCATACTTCTTCTGGGAAAGCAGTTAAATGCTCTACGTCCACAAACTGAGCCTATTGATTCATCGTACAGTAAGATAAATCCAAAGGATGAAGGATTCACTGAAGATGAATCCGCCACCAATAGTCCAAAATTTCAAGAATTAGGTCAGATGGAAATGGACAATGCTACTTCTGCTTTTGTGCAAAGATTGAGTTCGGAGTCTCCCTTACAATTTTCCAACAGTTTATTTAGCCCTTCGGACAGCGAGTCCACCCTTCCAGCCAGATCCCCAGTACAGCATTCTAAATCAAGACCAAAACACAGGCCCACCAAGTCAGCCTCTTCTTCAGTTCCTTCTGCCACTACACCTGAAAAGCATGCACGGGGATTTAGTAGATTCTTTTCACCGAAAGGAAAATCCGGTCATTAA 3630 0.4237 MAPLSFAKIGYSSQFRCLLASDTNHSKHPKGDTNCTPSIPNILLRNIATTSPPPPSPPPLSPSSILIDFLILHFSLFNLLVALLLPLLLSPHTVFAPIFLSRKSPLHKYHFISITPTPARAEALHPEFAMDRRWPWKKKSSEKAVIEKAATALDSSDASNNQDNKKPNYIQISAESYSHLSSLEDQVKTYEEKVQELEDEVKEINEKLSAANSEINTKESMVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLLKLTAEDRATHLDGALKECMRQIRNLKEEHELKIQDVALSKTKQLDQIKGELEAKIVNFEQELLRSAAENGALSRSLQERSNMLIKLSEDKARAEAEIELLKGNIEACERENNSLKYELHVASKELEIRNEEKNMSMRSAEAANKQQMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDFGESRLRKSPVKPASPNLSPLPDFSLENVQKFQKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEVQPQTSNQLKGSPKSIVQITHESIYNQNASSAPSLVSMSEDGNDDAVSCAESWSTAIVPGPSQFPKEKCTEESSKSEVSNKLELMDDFLEVEKLARLSNDSTVDATVSVSSNNKTPDIVNGDVSEVSIGKEGLSEKIGNSNLLPNQVSSDALMSAPDPQSDASGLILRELRSRILLVLESLAKDADIGKIVEDIKHVLEDSHDITIRHSVDAHPSDATCDRKDDPEDAGLNLEKDIISSQQPREYVHITSDLEAAISQIHDFVLLLGKEAVTFHDISCDGNEMRQKIEEFSVTFDKILNNNASLLQFVLDLSYVLDKASEFRFNVLCYKGTEVESNSSDCIDKIALPENKLVQDNSSRERYQTGCSHILSSCSNPEIPDDENLVSGYRVDAASQKLSMQEFEELKLEKEKVVTDLSNCTETLEITNSQLLETEQLLAEVKSQLASAKKSNSLAETQLKCMAESYNSLETRAQVLETEMNRLQIKIESLENELQDEKKAHEAALARSKVLEEQLQRIEYSAADDDIKTPHDRDLTAAAEKLAECQETILLLGKQLNALRPQTEPIDSSYSKINPKDEGFTEDESATNSPKFQELGQMEMDNATSAFVQRLSSESPLQFSNSLFSPSDSESTLPARSPVQHSKSRPKHRPTKSASSSVPSATTPEKHARGFSRFFSPKGKSGH 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00300 1209 Coils Coil 180 221 - -
Phco7g00300 1209 MobiDBLite consensus disorder prediction 1145 1209 - -
Phco7g00300 1209 Coils Coil 950 1040 - -
Phco7g00300 1209 Coils Coil 297 324 - -
Phco7g00300 1209 MobiDBLite consensus disorder prediction 1145 1165 - -
Phco7g00300 1209 MobiDBLite consensus disorder prediction 1089 1115 - -
Phco7g00300 1209 Pfam Filament-like plant protein, long coiled-coil 218 1091 IPR008587 -
Phco7g00300 1209 Coils Coil 332 398 - -
Phco7g00300 1209 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 130 1204 - -
Phco7g00300 1209 SUPERFAMILY Tropomyosin 928 1096 - -
Phco7g00300 1209 Coils Coil 475 502 - -
Phco7g00300 1209 Coils Coil 264 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00300 Phco-Chr7 2107279 2113009 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00300 7 2107279 2113009 Phco7g00300 7 2107279 2113009 ECH
Phco2g00091 2 804067 808959 Phco7g00300 7 2107279 2113009 PCT