Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02990 ATGGACTCATCTTCGTTTTCGAGCTTCCGCGCCTACCTCCACGCCCTCTCTCACACCCCCACGCGCCTTGCACAACGCGCTCTCTCCGTCTCCACCTCCTACGACGAGATGAGCCAGGTTCGTGCCCGCTCCGGCACCACCATGCGCAAGACCCTCCGCTGGTACGACCTCGTCTCCCTCGGCATCGGCGGAATGGTCGGCGCTGGCGTCTTTGTCACGACCGGCCACGCCACCCGCCTCTACGCTGGCCCCGCCGTACTCCTCTCCTACGCCATTGCCGGCTTCTGCGCCCTCCTCTCCGCCTTCTGCTACACCGAGTTCGCTGTTGACATGCCCGTCGCCGGCGGCGCCTTCAGCTATCTCCGCGTCACCTTCGGTGAATTCGCAGCTTTTATGACCGGCGCGAATCTCGTGGTGGACTACGTGCTTTCCAATGCCGCCGTCGCCCGAGGCTTCACGGCCTACCTCGGCACCGCAATCGGAATCTCCTCTGCGAAATGGCGGCTCACGGTGCCGTCTCTTCCCGACGGCTTCAACGAAATAGACGTCGTCGCTGTCGCAGTCGTTTTGCTCATCACTCTCGTCATCTGCTACAGCACGAGAGAGAGTTCGGTAGTGAACATGATCCTCACGGCGCTGCACATATTGTTCATAGCGTTCGTGATAATGATAGGATTCTGGAGAGGGAATTGGAAGAATTTCACCGAACCCGCTAACCCGGAAAACCCCGGCGGATTCTTTCCGCATGGCGCTGCCGGTGTGTTCAAAGGTGCCGCCGCCGTTTACTTGAGTTACATCGGCTACGACGCCGTTTCGACCATGGCAGAGGAAGTGAAGGACCCCGTGAGGGATATTCCGGTTGGAGTGTCCGGTTCCGTGGTTATCGTCACGGTTCTCTACTGTCTCATGGCCGCATCGATGACCAAACTACTCCCTTACGATATGATCGATGCAGAAGCGCCGTTTTCTGCGGCGTTCAGTGGGAAATCGGACGGTTGGGGATGGGTCTCTCGAGTGATAGGAGTGGGGGCCAGTTTCGGCATACTGACGTCGCTGTTAGTGGCGATGCTGGGTCAGGCTCGTTACATGTGCGTCATAGGTCGCTCTAACGTGGTCCCCTCATGGTTCGCTAGGGTCCACCCCAGGACCTCCACCCCTGTCAACGCCTCTGCTTTTCTTGGGATCTTCACAGCAGCAATCGCCCTTTTCACTGATCTTAATGTCCTCCTCAATCTGGTGTCAATTGGCACCCTCTTTGTCTTTTACATGGTGGCAAATGCCGTGATCTATAGACGTTATGTGGCTATGGGGACAAGCAATCCGTGGCCTACATTGTCCTTTCTCTGCTCCTTTTCCTTTACAGCAATCATGTTCACCCTTATTTGGAAATTTGTACCAACAGGAGGGGCGAAGGCAGGGATGCTGAGTGTCTCTGGTGTTATTGCCATTGCAATATTACAACTTTTCCATTGCATGGTCCCTCAAGTTCGAAAGCCAGAATTCTGGGGTGTCCCATTCATGCCATGGATACCCTCCATATCAATCTTTCTTAATGTGTTTCTGTTGGGATCCCTCGATGGGCCATCCTATGTTCGATTTGGATTCTTTTCGGCTGTTGCGGTGCTTTTCTATGTCTTTTACAGTGTCCATGCTAGCTTCGACGCTCAAGGAGATGATTCTTTCACTGCAAAAAATGGAGGAGAAATCCACGTGGAATCAAAGCAAATTGAGGACCAAAGTTTCAAAGTGTAG 1752 0.5451 MDSSSFSSFRAYLHALSHTPTRLAQRALSVSTSYDEMSQVRARSGTTMRKTLRWYDLVSLGIGGMVGAGVFVTTGHATRLYAGPAVLLSYAIAGFCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFMTGANLVVDYVLSNAAVARGFTAYLGTAIGISSAKWRLTVPSLPDGFNEIDVVAVAVVLLITLVICYSTRESSVVNMILTALHILFIAFVIMIGFWRGNWKNFTEPANPENPGGFFPHGAAGVFKGAAAVYLSYIGYDAVSTMAEEVKDPVRDIPVGVSGSVVIVTVLYCLMAASMTKLLPYDMIDAEAPFSAAFSGKSDGWGWVSRVIGVGASFGILTSLLVAMLGQARYMCVIGRSNVVPSWFARVHPRTSTPVNASAFLGIFTAAIALFTDLNVLLNLVSIGTLFVFYMVANAVIYRRYVAMGTSNPWPTLSFLCSFSFTAIMFTLIWKFVPTGGAKAGMLSVSGVIAIAILQLFHCMVPQVRKPEFWGVPFMPWIPSISIFLNVFLLGSLDGPSYVRFGFFSAVAVLFYVFYSVHASFDAQGDDSFTAKNGGEIHVESKQIEDQSFKV 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02990 583 Gene3D Amino acid/polyamine transporter I 47 493 - -
Phco6g02990 583 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 39 552 - -
Phco6g02990 583 PIRSF AA_transporter 33 493 - -
Phco6g02990 583 PIRSF AA_transporter 491 568 - -
Phco6g02990 583 Pfam Amino acid permease 53 478 IPR002293 GO:0016020|GO:0022857|GO:0055085
Phco6g02990 583 Pfam C-terminus of AA_permease 502 552 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02990 Phco-Chr6 51088031 51093246 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02990 6 51088031 51093246 Phco6g02990 6 51088031 51093246 ECH