Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02948 ATGGCCACTGCTTCTCTCATTCCACTTTCCTGGTTACCGCCGCTGTCTGCTCCTTTCAAGGGAACAGTGAAAACCTTAGTTGCGAAACCATGTCTGAAGATTCAGCGAGCAAGACCAGTCGTTTCCGCGGCTTATAAGTCTACGTCTGCCCCGGTTGCAGCGCCCATGGTCGGCGTTCGGTTTCGGCTGGACAATTTGGGGCCCCAACCGGGTTCCAGGAAGAGGGCAAAGAGAAAGGGTAGAGGAATATCGGCAGGGCAAGGCGCAAGTTGCGGTTTTGGGATGAGGGGTCAGAAATCTCGATCGGGGCCTGGAGTTATGAAGGGTTTCGAAGGTGGCCAGATGCCCCTTTATCGACGACTCCCCAAACTCAGAGGAATTGCAGGAGGTATGCACGCGGGATTGCCCAAATATGTCCATGTAAATCTTAGAGACATAGAAGATGCTAAATTTCAGGAAGGGGAAGAGGTGTCTCTTGAGTCACTGAAGGCGAAACGCGTGATTAACCCATCAGGAAGAGAAAGGAGACTTCCTTTGAAGATTTTGGGTGAAGGAGAACTGAGCAAGAAATTGACGCTAAAAGCCCGTGCCTTTTCCACAGCAGCGAAGGAGAAACTTGAGAGTGCTGGATGTTCTCTCACCTTGCTTCCTGGCCGCAAGAAATGGGTTAAGCCATCAGTTGCCAAAAACCTTGCTCGCGCTGAAGAATACTTTGCCAAGAAGCGCGCTGCAGCTGCAGCTGCAGCTGCCACCGAGGCAGCCCCCGCTTGA 771 0.524 MATASLIPLSWLPPLSAPFKGTVKTLVAKPCLKIQRARPVVSAAYKSTSAPVAAPMVGVRFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGVMKGFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVHVNLRDIEDAKFQEGEEVSLESLKAKRVINPSGRERRLPLKILGEGELSKKLTLKARAFSTAAKEKLESAGCSLTLLPGRKKWVKPSVAKNLARAEEYFAKKRAAAAAAAATEAAPA 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02948 256 Hamap 50S ribosomal protein L15 [rplO]. 63 216 IPR030878 GO:0003735|GO:0006412|GO:0015934
Phco6g02948 256 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 87 213 IPR021131 -
Phco6g02948 256 SUPERFAMILY Ribosomal proteins L15p and L18e 64 215 IPR036227 -
Phco6g02948 256 ProSitePatterns Ribosomal protein L15 signature. 180 210 IPR001196 GO:0003735|GO:0005840|GO:0006412
Phco6g02948 256 Gene3D - 138 214 - -
Phco6g02948 256 NCBIfam 50S ribosomal protein L15 63 213 IPR005749 GO:0003735|GO:0006412|GO:0015934
Phco6g02948 256 PANTHER 50S RIBOSOMAL PROTEIN L15 45 234 IPR005749 GO:0003735|GO:0006412|GO:0015934
Phco6g02948 256 MobiDBLite consensus disorder prediction 64 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02948 Phco-Chr6 50645584 50648469 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02948 6 50645584 50648469 Phco6g02948 6 50645584 50648469 ECH