Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02947 ATGGCTTTGCTGTTTCTTTACAGGAGACCAGAAGGAAACCCGTTAGATCTTAACAATTTGCCCGATGAGTACTCTAGAGATGGCAAACAAGTCCTCGAAGACCATACCTCTTCAACCGGTTGCAGGAAAAAGAAAAGCGGCGGGAAGGATGGAAAAGACGAGTGTGGGAAGGTCTACGAGTGTAGATTTTGTTCCCTTAAGTTCTGCAAGTCTCAGGCTCTTGGGGGACACATGAACCGCCACCGCCAAGAGAGGGAAACGGAGACACTGAACCAGGCTCGTCAACTGGTATTTCGAAGTGATCATAGCCTTGCTGCACAAGGTGCCCCTCACTTAGGATGCTGCCAACCCATTGGAACCGGTGGTTATCATCCAACAGGAGATCCAACGGCACCACTAAGATTCCCGAGGTACTTCTCAGGTTCATCCTCAACTCACATGCCGCCTCCAGCACCGGCACCGGTACCACCACAGCCATACCTGTATACCTCACCTACAAGGCCAGTGTCTTTTGGGTCATCACACTTCCCTCACCAGCATGCGGTGAATGATTACTATGTGGGTCATGTGATGAGTGGGAGTCACGGACACTATGTGGGAGGAGGAGGAGAGAGCACAAGTAGTTACACATGCATTGGTGCACCGGTGGGACAAGGTGGTGGTGCTCCTGCTGTAAAGGACGGGTCACTGCATAATAATCAGGAGGAAGGGTTGAGTTGGGGAAGGGGCTATCCCGCAGGAGCACAGCATCGATTGGATCCTCCCTCAGCGATCAATCGGTTTCAAGATGGTTTCTAA 798 0.515 MALLFLYRRPEGNPLDLNNLPDEYSRDGKQVLEDHTSSTGCRKKKSGGKDGKDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNQARQLVFRSDHSLAAQGAPHLGCCQPIGTGGYHPTGDPTAPLRFPRYFSGSSSTHMPPPAPAPVPPQPYLYTSPTRPVSFGSSHFPHQHAVNDYYVGHVMSGSHGHYVGGGGESTSSYTCIGAPVGQGGGAPAVKDGSLHNNQEEGLSWGRGYPAGAQHRLDPPSAINRFQDGF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02947 265 MobiDBLite consensus disorder prediction 11 52 - -
Phco6g02947 265 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 86 IPR013087 -
Phco6g02947 265 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
Phco6g02947 265 FunFam Zinc finger protein STAMENLESS 1 33 108 - -
Phco6g02947 265 Gene3D Classic Zinc Finger 35 110 - -
Phco6g02947 265 MobiDBLite consensus disorder prediction 22 52 - -
Phco6g02947 265 SUPERFAMILY beta-beta-alpha zinc fingers 51 103 IPR036236 -
Phco6g02947 265 PANTHER ZINC FINGER PROTEIN JAGGED 25 241 IPR045320 GO:0003700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco6g02947 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02947 6 50628806 50630619 Phco6g02947 6 50628806 50630619 ECH