Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02925 ATGAAGGGCCAAAATAATCAATACCCCTTAAACTCTGTTTCCAAGTTTTTCAATGCTCAATTTCACTTTGTTCGGTTTCTTGCATATATCGTTATTCTGGGCTTTGGTATAACCATTGGGGTTATCTTCAGTTTCTATCTTAAAGACTGCAACTTTAGTCTACAATTCACGCAGTTGTCACTCTCTTCCTTTCCGCGAACACCAACCCTGCCAACACCAACTACAAAACCAGAAATATCTAATCAAACTCAAATTCAGACACAAGTTCAAACTCAAACAGAAATCCAAACTCAAACACAAACTGAAATCCAAACTCAAACACAAACTGAAATTCAAACTGAGAGTAGTCACGTAGGATTGAAGGATTTCCTTCAGCCTCCTCATGTTGCGCATGATATGGACGACGAGGAATTGCTTTGGAGAGCTTCAATGACAGCAAAGATCCCCGATTACCCGTTTGACCGTGTTCCAAAGGTTGCCTTCATGTTCTTGACAAGGGGTCCTGTGTTTTTGGCACCTTTGTGGGAGAAATTCTTCGAAGGGAATGAAGGGTTGTACTCAATTTACGTGCACTCCAATCCATCGTACAATGGATCACGCCCGGAGAGTCCTGTATTTGAAGGTCGGAGAATTCCTAGTAAGGAAGTGGAATGGGGCAATGTGAACATGATTGAAGCTGAACGTCGCTTGTTGGCCAATGCACTTCTTGATATCGCAAACCAACGCTTTGTACTGCTGTCAGAATCATGCATACCACTCTTCAATTTCTCAACCATCTACACTTACTTGACAAACTCTACCCAAAACAATGTCATGGCTTTTGATGATCCAAGTTCTGTTGGCCGAGGCCGGTATAGTATCCAGATGTTGCCTGATATCTCCCTCAACCAATGGAGAAAAGGGTCCCAATGGTTTGAAATGGACAGAGAGCTTGCACTAGAAGTAGTATCTGACAGAGAATATTTCCCAGTTTTTCAAGAGTACTGCAAAGGTTCATGTTACGCAGATGAACATTACTTGCCAACGTACGTGAGCATCAAGTTTTGGGAGGGGAATTCAAATAGGAGTCTGACTTGGGTTGATTGGTCAAAGGGTGGCCCACACCCAGCTAAATTTCTGAGATCGGAGATTACTGTTCAGTTCTTGGAGAGTTTAAGGAATCAGAAATGCAAGTATAACGGAGATAGCATCAATGTCTGTTTTCTATTTGCTAGGAAATTTGCACCTAGTACAGTGTCGAAGCTCACGAAGATTGCACCCATGCGGAAAAACTTGAACCAAAATCAATCTTGGCATTCAGGAAAGTGGGCAAAGGACTAG 1320 0.4235 MKGQNNQYPLNSVSKFFNAQFHFVRFLAYIVILGFGITIGVIFSFYLKDCNFSLQFTQLSLSSFPRTPTLPTPTTKPEISNQTQIQTQVQTQTEIQTQTQTEIQTQTQTEIQTESSHVGLKDFLQPPHVAHDMDDEELLWRASMTAKIPDYPFDRVPKVAFMFLTRGPVFLAPLWEKFFEGNEGLYSIYVHSNPSYNGSRPESPVFEGRRIPSKEVEWGNVNMIEAERRLLANALLDIANQRFVLLSESCIPLFNFSTIYTYLTNSTQNNVMAFDDPSSVGRGRYSIQMLPDISLNQWRKGSQWFEMDRELALEVVSDREYFPVFQEYCKGSCYADEHYLPTYVSIKFWEGNSNRSLTWVDWSKGGPHPAKFLRSEITVQFLESLRNQKCKYNGDSINVCFLFARKFAPSTVSKLTKIAPMRKNLNQNQSWHSGKWAKD 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02925 439 Pfam Core-2/I-Branching enzyme 159 385 IPR003406 GO:0016020|GO:0016757
Phco6g02925 439 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 72 416 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02925 Phco-Chr6 50341522 50344544 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02925 6 50341522 50344544 Phco6g02925 6 50341522 50344544 ECH