Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02920 ATGGCCTCTGGTGAAGGGAGGCGGCGACATCATGATCTTGTGCCTCTTGCTGCCTTGCTCAAGAGAGAGATGAAGAGTGAGAAGATGGAGAAGCCTACCGTGAGGTTTGGACATGCAGCTCAGTCCAAGAAAGGGGAAGATTACTTTCTAATTAAGACGGATTGTCAGCGAGTGTCCGGAAACCCTTCATCATCCTTTTCAGTATTTGCGATCTTTGATGGGCATAATGGAAATGCTGCTGCTATTTTTACTAGGGAGAATTTGTTAAATCACGTGTTGAGTGCTCTTCCTCGGGGGCTTGGACGAGATGAGTGGTTGCAAGCTTTACCCAGGGCATTGGTTGCAGGGTTTGTTAAGACCGACAAGGAATTTCAGAGCAGAGGAGAAACTTCTGGAACCACAGCCACGATTGTAATAGTGGATAGGTGGACTGTTACTGTTGCATCTGTTGGAGATTCCCGTTGTGTACTAGATGCCCAGGGTGGTGCTGTTTCCTCCTTAACTGTTGATCACAGACTTGAAGAGAATATTGAAGAGAGGGAACGTGTAACTGCTAGTGGAGGTGAAGTTGGGAGACTTAGCATCGTTGGTGGTGCTGAGATTGGTCCCCTACGATGCTGGCCAGGGGGTCTATGCCTTTCTAGATCAATTGGAGACATGGATGTTGGAGAGTTCATAGTTCCTATACCATATGTTAAACAAGTGAAGCTATCAAAGGCTGGTGGGAGGCTTATAATTGCCTCTGATGGCATATGGGATGCTCTATCCTCGGAAATGGCTGCAAAATCTTGTCGAGGATTGCCTGCAGAACTTGCTGCCATGCAGGTTGTCAAGGAAGCACTACGAACAAGAGGATTAAAGGATGATACGACTTGCATAGTAGTTGACATAATCCCACCTGATAATGAATTGCCACCAACACCTCCCCCCCAAAAGCGGAACAAGCTGAGAGATCTTCTTTCGTTCAGGAAGAGGTCCCGTGATTCTGCTAGTAAGCTGTCAAAAAAGCTTTCAGCTATAAATATAGTGGAGGAACTGTTTGAAGAAGGATCAGCAATGCTAGCTGAAAGATTAGGAAATGATGACAACTTGAACACGGGGCAATCAACATCTGGCATTTTTGTTTGTGCTGTTTGTCAAGTTGATCTTGCTCCAAGTGAGGGCATCTCGGTCCACGCGGGTTCCATTTTCTCCACCAGCTCCAAACCCTGGCAAGGTCCTTTTCTTTGTTCTGATTGCCGTGATAAGAAGGATGCCATGGAAGGGAAACGTCCAAGTGGAGTTAAGGTGTCATAG 1296 0.4653 MASGEGRRRHHDLVPLAALLKREMKSEKMEKPTVRFGHAAQSKKGEDYFLIKTDCQRVSGNPSSSFSVFAIFDGHNGNAAAIFTRENLLNHVLSALPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATIVIVDRWTVTVASVGDSRCVLDAQGGAVSSLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDALSSEMAAKSCRGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPPPQKRNKLRDLLSFRKRSRDSASKLSKKLSAINIVEELFEEGSAMLAERLGNDDNLNTGQSTSGIFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCSDCRDKKDAMEGKRPSGVKVS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02920 431 SMART PP2C_SIG_2 30 297 IPR001932 -
Phco6g02920 431 FunFam probable protein phosphatase 2C 5 35 302 - -
Phco6g02920 431 SUPERFAMILY PP2C-like 40 297 IPR036457 -
Phco6g02920 431 CDD PP2Cc 36 297 IPR001932 -
Phco6g02920 431 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722|GO:0006470
Phco6g02920 431 Pfam Protein phosphatase 2C 61 269 IPR001932 -
Phco6g02920 431 SMART PP2C_4 27 295 IPR001932 -
Phco6g02920 431 Gene3D - 34 301 IPR036457 -
Phco6g02920 431 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02920 Phco-Chr6 50304698 50307979 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02920 6 50304698 50307979 Phco6g02920 6 50304698 50307979 ECH