Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02899 ATGTTACCCAAATTGTTAACCATGTCGATATCCATGTCCATGTCCTTCCAATCTGACACGCACAATGCTCTCGGCAGAGGATTTTCCATCTTCAGCTCCCTCCCACGCGCCACCGCGCCCTTCCGCCTCAGGGCTTTCTCCAACGCCGTCACCGATAAGCCCTCCGTTTGCACCGCTGACGAACTCCATTATGTCTCCCTCTCCAATTCCGATTGGAAACTCGCTCTCTGGCGCTACAACCCTTCGCCTCTCGTACCTCCGAGGAATCATCCTCTCTTGCTCTTGTCCGGCGTGGGAACTAACGCCATTGGATATGACCTTTCACCTGAGTCGTCATTTGCACGTTACATGTCTAGTCAGGGATTTGAAACTTGGATTCTTGAAGTACGAGGAGCTGGGTTGAGTCTTCAGGGTTCAAATTCTAAATATATTGAACAATCTGCTAATGCAATGTCTGAGAAGATGGAAGCTACTTCAGAAATTGCTACAGCCACCAATGGAGCCATGGCTTCAAATAAAGAATTAAATAACATCTCTTGCGCAGTATCTGAACCACAGATTTCTGTCTTAAACGGGGTAGAAACTGAGAATGTGGCCATCAAAGGTGACCTAACTAGGTTGGCTACTGTTTGGGATGAATCAAAGTCGGTGGCAAGGTTGACCGAGACTTTTATGTTTTTGTCAGAAAGGGTCTCTGGATTTCTGAGTGAAAGTCAATCAAGGGTGATGTTTTCCAAATTTCTAGATCAGATATCAAAACTTTTGGTGGATTCTCCATTATACGAACAATTCAATGAGGTAAGGGGAAAGCTTTCAACTTTGTTTGAAACAAAGCAAACCTCTGGTATTACTAGTCAAATAACTGATCTGAGTAAAAAACTAGTAAATATTATTGAGGAAGGTCAGCTATCTGTTTCTCCTCCATTATTTGATCTACAAACTCGCTTTACTTCTACAATAGAAGATTTTCAGAAGCAACTTGACTTAATTGTGAAGTATGATTGGGACTTTGATAATTACTTGGAAGAAGATGTTCCTGCAGCGATAGAATACATTGTGAAACAAAGCATGCCTAAAGATGGAAAATTGCTTGCAATTGGACACTCCATGGGTGGTATCTTGCTTTACTCCTTGCTGTCACGGTTTGGTTCAGAAGGAAAAGAACCAAATTTGGCTGCAGTGGTCACACTGGCATCATCTCTGGACTACACATCATCCAAATCAGCTCTGAAGTTACTCTTACCTTTAGCAGATCCTGCGCAGGCCCTGAATGTCCCTGTTGTTCCTTTGGGGGCAATGTTGGCTGCAGCTTATCCTCTGTCATGGTTAAATACTTTGATTTCAGCTGAGAACATGATGGATCCAGATTTATTAAAAAGACTTGTTTTGAATAACTTCTGCACCATACCCGCAAAACTTGTCTTGCAACTCACTACAGCATTTCGAGAACGTGGTTTATGCAACAGGAATGGGACCTTTTTTTATAAGGACCATCTACACAAAAGCAATACCCCTATCTTAGCTATTGCTGGAGACCGGGATCTGATTTGCCCACCTGAAGCTGTGGAAGAAACCGTTAAGGTAATTCCTGAGCACTTGGTTACCTATGAAGTTTTTGGAGAACCAGGAGGCCCACATTATGCTCATTATGATTTAGTTGGAGGAAGGCTGGCGGTGGAGCAGGTGTATCCCAGTATAATTGAATTTCTTAGCTGTCACGACAAGTGA 1728 0.4317 MLPKLLTMSISMSMSFQSDTHNALGRGFSIFSSLPRATAPFRLRAFSNAVTDKPSVCTADELHYVSLSNSDWKLALWRYNPSPLVPPRNHPLLLLSGVGTNAIGYDLSPESSFARYMSSQGFETWILEVRGAGLSLQGSNSKYIEQSANAMSEKMEATSEIATATNGAMASNKELNNISCAVSEPQISVLNGVETENVAIKGDLTRLATVWDESKSVARLTETFMFLSERVSGFLSESQSRVMFSKFLDQISKLLVDSPLYEQFNEVRGKLSTLFETKQTSGITSQITDLSKKLVNIIEEGQLSVSPPLFDLQTRFTSTIEDFQKQLDLIVKYDWDFDNYLEEDVPAAIEYIVKQSMPKDGKLLAIGHSMGGILLYSLLSRFGSEGKEPNLAAVVTLASSLDYTSSKSALKLLLPLADPAQALNVPVVPLGAMLAAAYPLSWLNTLISAENMMDPDLLKRLVLNNFCTIPAKLVLQLTTAFRERGLCNRNGTFFYKDHLHKSNTPILAIAGDRDLICPPEAVEETVKVIPEHLVTYEVFGEPGGPHYAHYDLVGGRLAVEQVYPSIIEFLSCHDK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02899 575 PANTHER LYSOSOMAL ACID LIPASE-RELATED 56 572 - -
Phco6g02899 575 ProSitePatterns Prolyl endopeptidase family serine active site. 344 374 IPR002471 GO:0004252|GO:0006508
Phco6g02899 575 PIRSF UCP031088_abhydr 5 575 IPR016969 -
Phco6g02899 575 Gene3D alpha/beta hydrolase 324 572 IPR029058 -
Phco6g02899 575 Gene3D alpha/beta hydrolase 61 158 IPR029058 -
Phco6g02899 575 SUPERFAMILY alpha/beta-Hydrolases 64 571 IPR029058 -
Phco6g02899 575 FunFam Alpha/beta hydrolase family protein 328 572 - -
Phco6g02899 575 FunFam Alpha/beta hydrolase family protein 61 155 - -
Phco6g02899 575 Pfam Serine aminopeptidase, S33 340 539 IPR022742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02899 Phco-Chr6 50143404 50148965 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02899 6 50143404 50148965 Phco6g02899 6 50143404 50148965 ECH