Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02897 ATGCAGAGACTCATGGTTCCTCCACATAGGTTTTTTTCCACTTCCCCTTTCCCACAGTATTCCATTCCGGACTTCGCTTTTTCCAATAACCAACCAAACAAAATATATTTATTCAATAAAAACATTTTTTCTATTAAACAAAAAATAAAAACAACAACAGCATCCACTTACTATAAGAACATCCAAGAGTGCGTTACCCTCTCCCTTCTCTCTCTCTCCTTCTCTCACGCTCTCATCATGGAGGTGCAACCGCCAACCCCCTCGACTGCGCCGCCACCTCCGCCGCCACACCTCAACTACCCTGATTCGGTGGAATCCTCCCCTCGCTCCCGCAACACCGACTCCTGGGACGAGCCCTTTGCGCCTGCCTCGTCCAAGCTACGTCTGATGTGCAGCTACGGCGGACATATCGTACCGCGCCCGCACGACAAGTCCCTCTGCTACGTTGGCGGCGACACGCGCATCATCGTTGCGGAACGCGCCACCTCACTCGCGGACCTCTCCACGCGCCTCTCCAAGACATTCCTTAACGGACGGCCCTTCACGCTGAAGTACCAGCTCCCGAACGAGGACCTCGATTCCCTCATCTCCGTCACCACCGACGAAGACCTGGAGAACATGATCGACGAGTACGACCGTACCGCCGCCGCCGCCACTTCCGTCATCAAACCCTCCCGCATCCGCCTCTTTCTCTTTCCTACCAAACCTGATTCCACTCACTCCATTCCCTCCCAAATCCTCGACACCTCAACCAAATCGGACGACTGGTTCTTGAATGCCCTAAACGGCAACGGAGTACCTAACCGAGGCTTTTCCGACTCTGCTTCTGTTAATTGCCTCGTCGATCTCGACGACGAGGTTGCTGGGAACAACCTCGAACCCGGTTCGAAGGACGCTGGGGAAGGTGGTGCTGGTGCTGGTGTTGGTGGTGGCGCTTCGTTGGGTGGATCTTTCGGGAACGGAAAGAATTTGAAGCAGGATGTTCACTCCGTTCCTGATTCGCCCATGCTCGAGACGACGTCGTCGTTTGGGTCCACTTCGTCGTCACCGTCACTCGCCAATTTGCCGCCGATTAGGGTTCACGTCGTGGAGGATCAGAAGGTAATGGGGATTGAGGAGCAGTTCGCGCAGATGGGGGTTGGTGTGGGGCAGAAGCAGCAGGATGAGGGTTTTGTTTTGCTGTCTTCGCCGCCTCCTCCGCCAGTCCCGGCTACCCTCTCCGCCGTGGGTGTACCGATTGGGCCACCGACGATTGTCGCCGGGGATTATCTCAACCGGGTTGTCTCCGATGATGAGAGATCCGATCATGGGGTTCCGGTTGGGTATAGAAAGCCACCCACTCCTCAACCACAGGTACAGACACAAACACAGTCACAGACACAAACACTTGCTCCTCAGTTTCAACAGAAGTCAACTGGTGGTAGCGGCGGTGTTGTTGATTTGCCTTCTCCTGATTCAGTTTCAAGTGATAGCAGTCTTGCGAACGCAATTTCGCGTCAGAAACCTGCTGTTTATCAAGAACAAGTTCAGATTCAATCTGGGACTACAAGGGTTCCTAGTAACCCTGTGGATCCGAAGCTCAATGTTTCTGATCCGCACGGTCGGATCCAGATGCAGCAACATGTACAGGACCCTGGATATTTGTTACAACAGCAATTTGAACAGCATCAGCAGTCCCATCAGCTGCCACAACAGCAATTCGAGCAGCACCAGCAGGCGCTGTCACAACAGCAATTCGAGCAGCACCAGCAGGCGCTGCCACAACAGCAGCAACAGTTTATTCATGGCACACATTTCATCCACCATAACCCTGCAATTTCTGCGTATTATCCTGTATATCCTTCCCAGCAACATCAACAGCATCCACAGCATCCACAGCATCCACAGCTTTACTATGTTCATACGAGGCAGCCGCAGGCTTACAACCTGCCTGTGCAGCAGGCAAATATGGGTGAGTCTGCGGGAAATCTTGCTTCTAGCCGGCCACAAACTCCACCAAATCCTGCTACATTGGTTCCACAATCTGCTGCATACAATCCCATGAGAAATGCCCCCATGCCTAAAACTGAAATGAATGCTTACAGAGCCGCAACTGCTGGATCCCCTCAACTAGTTCAAGTTCCTACAAGCCAACATCAGCAACAGTACGTCACTTACTCACAGATTCACCATCCATCTCAGTCCATGGCTCCCAATTCTGCTCCTCAGGCGAATTATGCTTTTGATTATGCGGACCCTGCTCATGCTCAAATATACTACTCTCAACCTTTGCCACCCACAATGCCTTCCCAGTACCAGACTATGACTGCTGCTGCTGTGATGATGCAGGAAGGTTCAGCTCAGCATCCCTCAGACAGTTTGAAGCAGCAGATAAGAACCTCACAGCCATTATAA 2394 0.523 MQRLMVPPHRFFSTSPFPQYSIPDFAFSNNQPNKIYLFNKNIFSIKQKIKTTTASTYYKNIQECVTLSLLSLSFSHALIMEVQPPTPSTAPPPPPPHLNYPDSVESSPRSRNTDSWDEPFAPASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIIVAERATSLADLSTRLSKTFLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTAAAATSVIKPSRIRLFLFPTKPDSTHSIPSQILDTSTKSDDWFLNALNGNGVPNRGFSDSASVNCLVDLDDEVAGNNLEPGSKDAGEGGAGAGVGGGASLGGSFGNGKNLKQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVVEDQKVMGIEEQFAQMGVGVGQKQQDEGFVLLSSPPPPPVPATLSAVGVPIGPPTIVAGDYLNRVVSDDERSDHGVPVGYRKPPTPQPQVQTQTQSQTQTLAPQFQQKSTGGSGGVVDLPSPDSVSSDSSLANAISRQKPAVYQEQVQIQSGTTRVPSNPVDPKLNVSDPHGRIQMQQHVQDPGYLLQQQFEQHQQSHQLPQQQFEQHQQALSQQQFEQHQQALPQQQQQFIHGTHFIHHNPAISAYYPVYPSQQHQQHPQHPQHPQLYYVHTRQPQAYNLPVQQANMGESAGNLASSRPQTPPNPATLVPQSAAYNPMRNAPMPKTEMNAYRAATAGSPQLVQVPTSQHQQQYVTYSQIHHPSQSMAPNSAPQANYAFDYADPAHAQIYYSQPLPPTMPSQYQTMTAAAVMMQEGSAQHPSDSLKQQIRTSQPL 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02897 797 MobiDBLite consensus disorder prediction 85 101 - -
Phco6g02897 797 MobiDBLite consensus disorder prediction 103 118 - -
Phco6g02897 797 SUPERFAMILY CAD & PB1 domains 142 242 - -
Phco6g02897 797 MobiDBLite consensus disorder prediction 430 532 - -
Phco6g02897 797 MobiDBLite consensus disorder prediction 317 354 - -
Phco6g02897 797 MobiDBLite consensus disorder prediction 83 118 - -
Phco6g02897 797 ProSiteProfiles PB1 domain profile. 126 234 IPR000270 GO:0005515
Phco6g02897 797 CDD PB1_UP2 130 232 - -
Phco6g02897 797 Pfam PB1 domain 142 233 IPR000270 GO:0005515
Phco6g02897 797 MobiDBLite consensus disorder prediction 775 797 - -
Phco6g02897 797 MobiDBLite consensus disorder prediction 652 674 - -
Phco6g02897 797 PANTHER OS05G0427100 PROTEIN-RELATED 99 590 - -
Phco6g02897 797 Gene3D - 146 232 - -
Phco6g02897 797 MobiDBLite consensus disorder prediction 333 354 - -
Phco6g02897 797 SMART PB1_new 141 234 IPR000270 GO:0005515
Phco6g02897 797 MobiDBLite consensus disorder prediction 553 589 - -
Phco6g02897 797 MobiDBLite consensus disorder prediction 447 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02897 Phco-Chr6 50125928 50128535 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02897 6 50125928 50128535 Phco6g02897 6 50125928 50128535 ECH