Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02892 ATGGGGAGAGGCAACAAAACAGTCCCATCTCACTCCGATGCGGTTGCGGAAGCATACTTTCCGCTTGATTCTGGCCATGCTCGTCTTCAAGAACTCGGGTACAAGCAAGAACTCAAGCGTCATCTATCGGTGATTTCAAATTTTGCGTTTACGTTTTCTATTATTTCGGTGCTCGCCGGAGTCACTACTCTTTACAACATTGGGTTGAACTATGGCGGCCCTGTTTCCTTCGTGTATGGTTGGTTGGTTGCCTCTGCTTTCACCATGACTGTGGCGCTTTCAATGGCTGAGATTTGCTCATCCTTTCCCACTTCCGGTGGGCTCTACTATTGGAGCGCCAAGCTTTCTGGGCCCACCTGGGCTCCTTTGCTTCCTGGATTACTGGCTGTTGAACGTGTCTTGGGTGACTACCAACTTTTTAACTTCATTTCCCCAATTACTGGCTGGTTCAATATTGTTGGCCAGTGGGCAGTGACAACAAGTGTGGATTTTTCACTTGCACAACTGATTCAAGTTATTATTCTCCTTAGTACTGGTGGGAAAAATGGTGGCGGGTATGAGGCTTCTAAATACGTAGTTATTGCTTTGCATGGGGTGATTTTGCTCCTACACGGTATGATAAACAACCTTCCTATCTCATTGTTATCATTCTTGGGACGGCTGGCAGCTATTTGGAATGTTGTAGGTGTTTTTGTGCTTATGATTGGTATTCCATCTGTTGCAACGGAAAGGGCTAGTGCCAACTTTGTTTTTACTCATTTCAATACTGAAAATGAGGATGGAATCAGCAGCAAGCCCTACATATTTCTCTTGGGACTTCTAATGAGTCAGTATACCCTAACTGGATTTGATGCATCAGCTTATATGACAGAGGAAACCAGGGATGCTGACTTAAATGGACCAAAAGGAATTGTGAGTGCTGTTGGGATATCCATTATAGTTGGGTGGGGTTACATACTAGGCATTACCTTTGCAGTCACCGACATTCATTACCTTTTGAGTGAAGATAATGACGCTGGAGGGTATGCTATTGCTGAAGTGTTTTATCTAGCATTCAAGAGAAGATATGGTCATGGAACTGGGGGTATTGTTTGCTTAGTAATTGTTGCTGTTGCCATATTTTTCTGTGGTATGAGTTCCGTTACAAGCAATTCAAGGATGGTTTATGCTTTCTCTAGAGATAGGGCCCTGCCATTGTCATCATTGTGGCGCAGAGTAAACGAGCAGGAGGTTCCCATCTATGCAGTTTGGCTTTCCGTTTCAATATCATTTTGCATGGCCTTAACGTCTCTTGGAAGCATAGTGGCATTTGAGGCCATGGTATCCATTGCAACGATTGGTCTCTACATTGCTTATGCCCTACCTATATTCTTTAGGGTGACCTTGGCACGGAAGGATTTTATCCCTGGCCCTTTCAACCTAGGCCGTTACGGAGTCATTGTTGGCTGGGTGGCTGTTCTTTGGGTGCTGACCATTTCCATACTCTTCTCATTGCCTGTTTCTTACCCAATAACCATGCAGACACTTAACTACACCCCTGTGGCTGTTGGATGTTTGCTTCTTCTTGTTGTTTCTTTCTGGTTAATCAGTGGTCGCCGTTGGTTTAAAGGCCCTGTAGCCAATATATAA 1629 0.4457 MGRGNKTVPSHSDAVAEAYFPLDSGHARLQELGYKQELKRHLSVISNFAFTFSIISVLAGVTTLYNIGLNYGGPVSFVYGWLVASAFTMTVALSMAEICSSFPTSGGLYYWSAKLSGPTWAPLLPGLLAVERVLGDYQLFNFISPITGWFNIVGQWAVTTSVDFSLAQLIQVIILLSTGGKNGGGYEASKYVVIALHGVILLLHGMINNLPISLLSFLGRLAAIWNVVGVFVLMIGIPSVATERASANFVFTHFNTENEDGISSKPYIFLLGLLMSQYTLTGFDASAYMTEETRDADLNGPKGIVSAVGISIIVGWGYILGITFAVTDIHYLLSEDNDAGGYAIAEVFYLAFKRRYGHGTGGIVCLVIVAVAIFFCGMSSVTSNSRMVYAFSRDRALPLSSLWRRVNEQEVPIYAVWLSVSISFCMALTSLGSIVAFEAMVSIATIGLYIAYALPIFFRVTLARKDFIPGPFNLGRYGVIVGWVAVLWVLTISILFSLPVSYPITMQTLNYTPVAVGCLLLLVVSFWLISGRRWFKGPVANI 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02892 542 PANTHER AMINO-ACID PERMEASE BAT1 20 542 - -
Phco6g02892 542 Gene3D Amino acid/polyamine transporter I 36 535 - -
Phco6g02892 542 Pfam Amino acid permease 42 516 IPR002293 GO:0016020|GO:0022857|GO:0055085
Phco6g02892 542 ProSitePatterns Amino acid permeases signature. 72 103 IPR004840 GO:0006865|GO:0016020|GO:0055085
Phco6g02892 542 FunFam Amino-acid permease BAT1 36 534 - -
Phco6g02892 542 PIRSF AA_transporter 29 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02892 Phco-Chr6 50061227 50066854 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02892 6 50061227 50066854 Phco6g02892 6 50061227 50066854 ECH